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Protein Overview: DRP1D_ARATH

General Information:
Name(s) found: DRP1D_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Dynamin-related protein 1D OS=Arabidopsis thaliana GN=DRP1D PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 612 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: GTP binding [IEA][ISS]
    GTPase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESLIVLINT IQRACTVVGD HGGDSNALSS LWEALPSVAV VGGQSSGKSS VLESIVGRDF  60
   61 LPRGSGIVTR RPLVLQLHKT ENGTEDNAEF LHLTNKKFTN FSLVRKEIED ETDRITGKNK 120
  121 QISSIPIHLS IFSPNVVNLT LIDLPGLTKV AVEGQPETIV EDIESMVRSY VEKPNCLILA 180
  181 ISPANQDIAT SDAMKLAKEV DPIGDRTFGV LTKLDLMDKG TNALDVINGR SYKLKYPWVG 240
  241 IVNRSQADIN KNVDMMVARR KEREYFETSP DYGHLATRMG SEYLAKLLSK LLESVIRSRI 300
  301 PSILSLINNN IEELERELDQ LGRPIAIDAG AQLYTILGMC RAFEKIFKEH LDGGRPGGAR 360
  361 IYGIFDYNLP TAIKKLPFDR HLSLQSVKRI VSESDGYQPH LIAPELGYRR LIEGSLNHFR 420
  421 GPAEASVNAI HLILKELVRK AIAETEELKR FPSLQIELVA AANSSLDKFR EESMKSVLRL 480
  481 VDMESSYLTV DFFRKLHVES QNMSLSSPTS AIDQYGDGHF RKIASNVAAY IKMVAETLVN 540
  541 TIPKAVVHCQ VRQAKLSLLN YFYAQISQSQ GKRLGQLLDE NPALMERRMQ CAKRLELYKK 600
  601 ARDEIDAAVW VR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..324] PSI-BLAST 97.045757 Structure of the nucleotide-free myosin II motor domain from Dictyostelium discoideum fused to the GTPase domain of dynamin 1 from Rattus norvegicus
    2 View Details [325..506] Pfam 9.823909 No description for PF01031.11 was found. No confident structure predictions are available.
    3 View Details [507..612] Pfam 38.29243 No description for PF02212.9 was found. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle