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Protein Overview: gi|25084214, gi|...

General Information:
Name(s) found: gi|25084214 [NCBI NR]
gi|22329004 [NCBI NR]
gi|19698887 [NCBI NR]
gi|15384676 [NCBI NR]
Description(s) found:
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  • gi|25084214|gb|AAN72198.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|22329004|ref|NP_194590.2| PHR1 (PHOSPHATE STARVATION RESPONSE 1); transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|19698887|gb|AAL91179.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15384676|emb|CAC59689.1| phosphate starvation response regulator 1 [Arabidopsis thaliana] [NCBI NR]
  • phosphate starvation response regulator 1 [Arabidopsis thaliana]gi|19698887|gb|AAL91179.1| putative protein [Arabidopsis thaliana]gi|25084214|gb|AAN72198.1| putative protein [Arabidopsis thaliana]gi|22329004|ref|NP_194590.2| myb family transcription fa [nrdb_11152004_Chlamydomonas]
  • | Symbols: ATPHR1, PHR1 | PHR1 (PHOSPHATE STARVATION RESPONSE 1); transcription factor | chr4:14133170-14134957 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • PHR1 (PHOSPHATE STARVATION RESPONSE 1); transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • phosphate starvation response regulator 1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: PHR1, AtPHR1 | phosphate starvation response 1 | chr4:14133164-14134951 REVERSE LENGTH=409 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Phosphate starvation response 1 protein OS=Arabidopsis thaliana GN=phr1 PE=2 SV=1 [ARATH-contam.fasta]
  • Phosphate starvation response 1 protein OS=Arabidopsis thaliana GN=phr1 PE=1 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 409 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: regulation of transcription [TAS]
    cellular response to phosphate starvation [IMP]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEARPVHRSG SRDLTRTSSI PSTQKPSPVE DSFMRSDNNS QLMSRPLGQT YHLLSSSNGG  60
   61 AVGHICSSSS SGFATNLHYS TMVSHEKQQH YTGSSSNNAV QTPSNNDSAW CHDSLPGGFL 120
  121 DFHETNPAIQ NNCQIEDGGI AAAFDDIQKR SDWHEWADHL ITDDDPLMST NWNDLLLETN 180
  181 SNSDSKDQKT LQIPQPQIVQ QQPSPSVELR PVSTTSSNSN NGTGKARMRW TPELHEAFVE 240
  241 AVNSLGGSER ATPKGVLKIM KVEGLTIYHV KSHLQKYRTA RYRPEPSETG SPERKLTPLE 300
  301 HITSLDLKGG IGITEALRLQ MEVQKQLHEQ LEIQRNLQLR IEEQGKYLQM MFEKQNSGLT 360
  361 KGTASTSDSA AKSEQEDKKT ADSKEVPEEE TRKCEELESP QPKRPKIDN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..202] deduced N/A No confident structure predictions are available.
    2 View Details [203..310] PSI-BLAST 23.30103 Arr10-B
    3 View Details [311..409] MSA 1.159991 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle