Protein Overview: gi|14140154

General Information:
Name(s) found:	gi\|14140154 [NCBI NR]
Description(s) found: Found 2 descriptions. SHOW ALL	gi\|14140154\|emb\|CAC39071.1\| DnaJ-like protein [Oryza sativa] [NCBI NR]
Organism:	Oryza sativa
Length:	420 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYGRMPKKSN NTKYYEVLGV SKTATQDELK KAYRKAAIKN HPDKGGDPEK FKELAQAYEV  60
   61 LNDPEKREIY DQYGEDALKE GMGGGSSSDF HSPFDLFEQI FQNRGGFGGR GHRQKRGEDV 120
  121 VHTMKVSLED LYNGTTKKLS LSRNALCTKC KGKGSKSGAA ATCHGCHGAG MRTITRQIGL 180
  181 GMIQQMNTVC PECRGSGEMI SDKDKCPSCK GNKVVQQKKV LEVHVEKGMQ HGQKIVFQGE 240
  241 ADEAPDTVTG DIVFVLQLKD HPKFKRKFDD LFTEHTISLT EALCGFQFVL THLDGRQLLI 300
  301 KSNPGEVIKP GQHKAINDEG MPQHGRPFMK GRLFVEFNVE FPEPGALTPG QCRSLEKILP 360
  361 PRPRNQLSDM ELDQCEETTM HDVNIEEEMR RRQQHRRQEA YDEDDDEDAG AGPRVQCAQQ 420
  421

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..92]	PSI-BLAST	18.69897	J-DOMAIN (RESIDUES 1-77) OF THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 1-104) OF THE MOLECULAR CHAPERONE DNAJ, NMR, 20 STRUCTURES
2	View Details	[93..420]	PSI-BLAST	49.221849	The crystal structure of Hsp40 Ydj1

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
unfolded protein binding	3.04403163860617	bayes_pls_golite062009
chaperone binding	2.86745334638583	bayes_pls_golite062009
protein binding	2.65982681685488	bayes_pls_golite062009
binding	2.63138872417193	bayes_pls_golite062009
heat shock protein binding	2.17994194200939	bayes_pls_golite062009
transcription regulator activity	1.91297632253219	bayes_pls_golite062009
nucleic acid binding	1.6342534817623	bayes_pls_golite062009
DNA binding	1.55234338199368	bayes_pls_golite062009
Hsp70 protein binding	0.541755903922701	bayes_pls_golite062009
transferase activity	0.240656521918556	bayes_pls_golite062009
catalytic activity	0.106988907594358	bayes_pls_golite062009
receptor binding	0.0658139321670459	bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor	0.0276971914937192	bayes_pls_golite062009

2

Term	Confidence	Notes
binding	2.7298921704023	bayes_pls_golite062009
protein binding	2.6297172985864	bayes_pls_golite062009
protein disulfide isomerase activity	2.4409950647303	bayes_pls_golite062009
intramolecular oxidoreductase activity, transposing S-S bonds	2.4409950647303	bayes_pls_golite062009
intramolecular oxidoreductase activity, interconverting keto- and enol-groups	2.23398279564144	bayes_pls_golite062009
unfolded protein binding	2.04158808514315	bayes_pls_golite062009
receptor binding	1.01508461105961	bayes_pls_golite062009
catalytic activity	0.276917867171685	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle