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Protein Overview: RNZN_ARATH

General Information:
Name(s) found: RNZN_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Nuclear ribonuclease Z OS=Arabidopsis thaliana GN=NUZ PE=2 SV=3 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 280 amino acids

    Gene Ontology:
    Cellular Component: nucleus [TAS]
    Biological Process: tRNA processing [TAS]
    tRNA 3'-end processing [IDA]
    Molecular Function: 3'-tRNA processing endoribonuclease activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKKKAMQIE GYPIEGLSIG GHETCIIFPS LRIAFDIGRC PHRAISQDFL FISHSHMDHI  60
   61 GGLPMYVATR GLYKMKPPTI IVPASIKETV ESLFEVHRKL DSSELKHNLV GLDIGEEFII 120
  121 RKDLKVKAFK TFHVIQSQGY VVYSTKYKLK KEYIGLSGNE IKNLKVSGVE ITDSIITPEV 180
  181 AFTGDTTSDF VVDETNADAL KAKVLVMEST FLDDSVSVEH ARDYGHIHIS EIVNHAEKFE 240
  241 NKAILLIHFS ARYTVKEIED AVSALPPPLE GRVFALTQGF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..280] PSI-BLAST 39.0 Crystal structure of RNase Z

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.411342240547828 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle