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Protein Overview: LACS6_ARATH

General Information:
Name(s) found: LACS6_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Long chain acyl-CoA synthetase 6, peroxisomal OS=Arabidopsis thaliana GN=LACS6 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 701 amino acids

    Gene Ontology:
    Cellular Component: membrane [IDA]
    Biological Process: long-chain fatty acid metabolic process [TAS]
    Molecular Function: long-chain fatty acid-CoA ligase activity [TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSSSSSSSA AARRRINAIH SHLVTSSRSS PLLRSNPTAG EFCLDNGYSV VLPEKLNTGS  60
   61 WNVYRSAKSP FKLVSRFPDH PDIATLHDNF EHAVHDFRDY KYLGTRVRVD GTVGDYKWMT 120
  121 YGEAGTARTA LGSGLVHHGI PMGSSVGIYF INRPEWLIVD HACSSYSYVS VPLYDTLGPD 180
  181 AVKFIVNHAT VQAIFCVAET LNSLLSCLSE MPSVRLVVVV GGLIESLPSL PSSSGVKVVS 240
  241 YSVLLNQGRS NPQRFFPPKP DDVATICYTS GTTGTPKGVV LTHANLIANV AGSSFSVKFF 300
  301 SSDVYISYLP LAHIYERANQ ILTVYFGVAV GFYQGDNMKL LDDLAALRPT VFSSVPRLYN 360
  361 RIYAGIINAV KTSGGLKERL FNAAYNAKKQ ALLNGKSASP IWDRLVFNKI KDRLGGRVRF 420
  421 MTSGASPLSP EVMEFLKVCF GGRVTEGYGM TETSCVISGM DEGDNLTGHV GSPNPACEVK 480
  481 LVDVPEMNYT SADQPHPRGE ICVRGPIIFT GYYKDEIQTK EVIDEDGWLH TGDIGLWLPG 540
  541 GRLKIIDRKK NIFKLAQGEY IAPEKIENVY AKCKFVGQCF IYGDSFNSSL VAVVSVDPDV 600
  601 LKSWAASEGI KGGDLRELCN NPRVKAAVLS DMDTVGREAQ LRGFEFAKAV TLVLEPFTLE 660
  661 NGLLTPTFKI KRPQAKEYFA EAITNMYKEL GASDPSANRG L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..701] PSI-BLAST 141.0 No description for 2p2bA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle