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View Structure Prediction Details

Protein: LACS6_ARATH
Organism: Arabidopsis thaliana
Length: 701 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LACS6_ARATH.

Description E-value Query
Range
Subject
Range
gi|13516481 - gi|13516481|dbj|BAB40450.1| long-chain acyl-CoA synthetase [Arabidopsis thaliana]
593.0 [0..16] [697..16]

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Predicted Domain #1
Region A:
Residues: [1-701]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSSSSSSSA AARRRINAIH SHLVTSSRSS PLLRSNPTAG EFCLDNGYSV VLPEKLNTGS  60
   61 WNVYRSAKSP FKLVSRFPDH PDIATLHDNF EHAVHDFRDY KYLGTRVRVD GTVGDYKWMT 120
  121 YGEAGTARTA LGSGLVHHGI PMGSSVGIYF INRPEWLIVD HACSSYSYVS VPLYDTLGPD 180
  181 AVKFIVNHAT VQAIFCVAET LNSLLSCLSE MPSVRLVVVV GGLIESLPSL PSSSGVKVVS 240
  241 YSVLLNQGRS NPQRFFPPKP DDVATICYTS GTTGTPKGVV LTHANLIANV AGSSFSVKFF 300
  301 SSDVYISYLP LAHIYERANQ ILTVYFGVAV GFYQGDNMKL LDDLAALRPT VFSSVPRLYN 360
  361 RIYAGIINAV KTSGGLKERL FNAAYNAKKQ ALLNGKSASP IWDRLVFNKI KDRLGGRVRF 420
  421 MTSGASPLSP EVMEFLKVCF GGRVTEGYGM TETSCVISGM DEGDNLTGHV GSPNPACEVK 480
  481 LVDVPEMNYT SADQPHPRGE ICVRGPIIFT GYYKDEIQTK EVIDEDGWLH TGDIGLWLPG 540
  541 GRLKIIDRKK NIFKLAQGEY IAPEKIENVY AKCKFVGQCF IYGDSFNSSL VAVVSVDPDV 600
  601 LKSWAASEGI KGGDLRELCN NPRVKAAVLS DMDTVGREAQ LRGFEFAKAV TLVLEPFTLE 660
  661 NGLLTPTFKI KRPQAKEYFA EAITNMYKEL GASDPSANRG L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 141.0
Match: 2p2bA
Description: No description for 2p2bA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle