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Protein Overview: ATBH9_ARATH

General Information:
Name(s) found: ATBH9_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Homeobox-leucine zipper protein ATHB-9 OS=Arabidopsis thaliana GN=ATHB-9 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 841 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA][ISS]
    Biological Process: integument development [IGI]
    embryonic pattern specification [IGI]
    primary shoot apical meristem specification [IMP]
    regulation of transcription, DNA-dependent [ISS]
    polarity specification of adaxial/abaxial axis [IMP]
    adaxial/abaxial axis specification [IMP]
    determination of bilateral symmetry [IMP]
    meristem initiation [IMP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]
    protein binding [NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMAHHSMDDR DSPDKGFDSG KYVRYTPEQV EALERVYAEC PKPSSLRRQQ LIRECPILCN  60
   61 IEPRQIKVWF QNRRCREKQR KESARLQTVN RKLSAMNKLL MEENDRLQKQ VSNLVYENGF 120
  121 MKHRIHTASG TTTDNSCESV VVSGQQRQQQ NPTHQHPQRD VNNPANLLSI AEETLAEFLC 180
  181 KATGTAVDWV QMIGMKPGPD SIGIVAVSRN CSGIAARACG LVSLEPMKVA EILKDRPSWF 240
  241 RDCRCVETLN VIPTGNGGTI ELVNTQIYAP TTLAAARDFW TLRYSTSLED GSYVVCERSL 300
  301 TSATGGPNGP LSSSFVRAKM LSSGFLIRPC DGGGSIIHIV DHVDLDVSSV PEVLRPLYES 360
  361 SKILAQKMTV AALRHVRQIA QETSGEVQYS GGRQPAVLRT FSQRLCRGFN DAVNGFVDDG 420
  421 WSPMSSDGGE DITIMINSSS AKFAGSQYGS SFLPSFGSGV LCAKASMLLQ NVPPLVLIRF 480
  481 LREHRAEWAD YGVDAYSAAS LRATPYAVPC VRTGGFPSNQ VILPLAQTLE HEEFLEVVRL 540
  541 GGHAYSPEDM GLSRDMYLLQ LCSGVDENVV GGCAQLVFAP IDESFADDAP LLPSGFRVIP 600
  601 LDQKTNPNDH QSASRTRDLA SSLDGSTKTD SETNSRLVLT IAFQFTFDNH SRDNVATMAR 660
  661 QYVRNVVGSI QRVALAITPR PGSMQLPTSP EALTLVRWIT RSYSIHTGAD LFGADSQSCG 720
  721 GDTLLKQLWD HSDAILCCSL KTNASPVFTF ANQAGLDMLE TTLVALQDIM LDKTLDDSGR 780
  781 RALCSEFAKI MQQGYANLPA GICVSSMGRP VSYEQATVWK VVDDNESNHC LAFTLVSWSF 840
  841 V

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..82] PSI-BLAST 19.154902 No description for 2r5yA was found.
    2 View Details [83..184] deduced N/A No confident structure predictions are available.
    3 View Details [185..391] PSI-BLAST 32.0 No description for 2psoA was found.
    4 View Details [392..562] MSA 1.060979 View MSA. No confident structure predictions are available.
    5 View Details [563..681] deduced N/A No confident structure predictions are available.
    6 View Details [682..841] Pfam 87.537602 No description for PF08670.3 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

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    Created and Maintained by: Michael Riffle