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View Structure Prediction Details

Protein: ATBH9_ARATH
Organism: Arabidopsis thaliana
Length: 841 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for ATBH9_ARATH.

Predicted Domain #1
Region A:
Residues: [1-82]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMAHHSMDDR DSPDKGFDSG KYVRYTPEQV EALERVYAEC PKPSSLRRQQ LIRECPILCN  60
   61 IEPRQIKVWF QNRRCREKQR KE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.154902
Match: 2r5yA
Description: No description for 2r5yA was found.

Predicted Domain #2
Region A:
Residues: [83-184]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SARLQTVNRK LSAMNKLLME ENDRLQKQVS NLVYENGFMK HRIHTASGTT TDNSCESVVV  60
   61 SGQQRQQQNP THQHPQRDVN NPANLLSIAE ETLAEFLCKA TG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [185-391]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TAVDWVQMIG MKPGPDSIGI VAVSRNCSGI AARACGLVSL EPMKVAEILK DRPSWFRDCR  60
   61 CVETLNVIPT GNGGTIELVN TQIYAPTTLA AARDFWTLRY STSLEDGSYV VCERSLTSAT 120
  121 GGPNGPLSSS FVRAKMLSSG FLIRPCDGGG SIIHIVDHVD LDVSSVPEVL RPLYESSKIL 180
  181 AQKMTVAALR HVRQIAQETS GEVQYSG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.0
Match: 2psoA
Description: No description for 2psoA was found.

Predicted Domain #4
Region A:
Residues: [392-562]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GRQPAVLRTF SQRLCRGFND AVNGFVDDGW SPMSSDGGED ITIMINSSSA KFAGSQYGSS  60
   61 FLPSFGSGVL CAKASMLLQN VPPLVLIRFL REHRAEWADY GVDAYSAASL RATPYAVPCV 120
  121 RTGGFPSNQV ILPLAQTLEH EEFLEVVRLG GHAYSPEDMG LSRDMYLLQL C

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [563-681]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGVDENVVGG CAQLVFAPID ESFADDAPLL PSGFRVIPLD QKTNPNDHQS ASRTRDLASS  60
   61 LDGSTKTDSE TNSRLVLTIA FQFTFDNHSR DNVATMARQY VRNVVGSIQR VALAITPRP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [682-841]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSMQLPTSPE ALTLVRWITR SYSIHTGADL FGADSQSCGG DTLLKQLWDH SDAILCCSLK  60
   61 TNASPVFTFA NQAGLDMLET TLVALQDIML DKTLDDSGRR ALCSEFAKIM QQGYANLPAG 120
  121 ICVSSMGRPV SYEQATVWKV VDDNESNHCL AFTLVSWSFV 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 87.537602
Match: PF08670.3
Description: No description for PF08670.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle