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Protein Overview: DEK1_ARATH

General Information:
Name(s) found: DEK1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|30695930|ref|NP_850967.1| DEK1 (DEFECTIVE KERNEL 1); calcium-dependent cysteine-type endopeptidase/ cysteine-type endopeptidase [Arabidopsis thaliana] [NCBI NR]
  • gi|30695928|ref|NP_850966.1| DEK1 (DEFECTIVE KERNEL 1); calcium-dependent cysteine-type endopeptidase/ cysteine-type endopeptidase [Arabidopsis thaliana] [NCBI NR]
  • gi|30695926|ref|NP_850965.1| DEK1 (DEFECTIVE KERNEL 1); calcium-dependent cysteine-type endopeptidase/ cysteine-type endopeptidase [Arabidopsis thaliana] [NCBI NR]
  • gi|22330261|ref|NP_175932.2| DEK1 (DEFECTIVE KERNEL 1); calcium-dependent cysteine-type endopeptidase/ cysteine-type endopeptidase [Arabidopsis thaliana] [NCBI NR]
  • gi|20268660|gb|AAL38186.1| calpain-like protein [Arabidopsis thaliana] [NCBI NR]
  • Calpain-type cysteine protease DEK1 OS=Arabidopsis thaliana GN=DEK1 PE=1 SV=1 [Swiss-Prot]
  • calpain-like protein [Arabidopsis thaliana]gi|30695928|ref|NP_850966.1| calpain-type cysteine protease family [Arabidopsis thaliana]gi|30695926|ref|NP_850965.1| calpain-type cysteine protease family [Arabidopsis thaliana]gi|30695930|ref|NP_850967.1| ca [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Calpain-type cysteine protease family [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: EMB1275, ATDEK1, DEK1 | DEK1 (DEFECTIVE KERNEL 1); calcium-dependent cysteine-type endopeptidase/ cysteine-type endopeptidase | chr1:20658129-20668167 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • calpain-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • DEK1; calpain/ cysteine-type endopeptidase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: DEK1, ATDEK1 | calpain-type cysteine protease family | chr1:20654463-20664501 REVERSE LENGTH=2151 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • | Symbols: EMB80, DEK1, EMB1275, ATDEK1 | calpain-type cysteine protease family | chr1:20654463-20664501 REVERSE LENGTH=2151 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Calpain-like protein OS=Arabidopsis thaliana GN=DEK1 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 2151 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: embryonic development ending in seed dormancy [IMP][NAS]
    [NOT]endosperm development [IMP]
    cell fate specification [IMP]
    Molecular Function: cysteine-type endopeptidase activity [IEA]
    calcium-dependent cysteine-type endopeptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGDERGVLL ACVISGTLFT VFGSGSFWIL WAVNWRPWRL YSWIFARKWP KVLQGPQLDI  60
   61 LCGVLSLFAW IVVVSPIAIL IGWGSWLIVI LDRHIIGLAI IMAGTALLLA FYSIMLWWRT 120
  121 QWQSSRAVAL LLLLGVALLC AYELCAVYVT AGAHASQQYS PSGFFFGVSA IALAINMLFI 180
  181 CRMVFNGNGL DVDEYVRRAY KFAYSDCIEV GPVACLPEPP DPNELYPRQT SRASHLGLLY 240
  241 LGSLVVLLAY SVLYGLTARE SRWLGGITSA AVIVLDWNIG ACLYGFKLLQ NRVLALFVAG 300
  301 ISRLFLICFG IHYWYLGHCI SYIFVASVLS GAAVSRHLSI TDPSAARRDA LQSTVIRLRE 360
  361 GFRRKEQNSS SSSSDGCGSS IKRSSSIDAG HTGCTNEANR TAESCTADNL TRTGSSQEGI 420
  421 NSDKSEESGR PSLGLRSSSC RSVVQEPEAG TSYFMDKVSD QNNTLVVCSS SGLDSQGYES 480
  481 STSNSANQQL LDMNLALAFQ DQLNNPRIAS ILKKKAKEGD LELTNLLQDK GLDPNFAVML 540
  541 KEKNLDPTIL ALLQRSSLDA DRDHRDNTDI TIIDSNSVDN TLPNQISLSE ELRLRGLEKW 600
  601 LKLSRLLLHH VAGTPERAWG LFSLVFILET IIVAIFRPKT ITIINSSHQQ FEFGFSVLLL 660
  661 SPVVCSIMAF LRSLQVEEMA LTSKSRKYGF VAWLLSTSVG LSLSFLSKSS VLLGISLTVP 720
  721 LMAACLSIAV PIWMHNGYQF WVPQLSCGDQ ARDLRSPRIK GFILWICVVL FAGSVISLGA 780
  781 IISAKPLDDL KYKLFSAREN NVTSPYTSSV YLGWAMSSGI ALVVTAILPI VSWFATYRFS 840
  841 HSSAVCLMIF SVVLVAFCGT SYLEVVKSRD DQLPTKGDFL AALLPLACIP ALLSLCCGMV 900
  901 KWKDDCWILS RGVYVFFSIG LLLLFGAIAA VIAVKPWTIG VSFLLVLFLM VVTIGVIHLW 960
  961 ASNNFYLTRK QTSFVCFLAL LLGLAAFLLG WHQDKAFAGA SVGYFTFLSL LAGRALAVLL1020
 1021 SPPIVVYSPR VLPVYVYDAH ADCGKNVSAA FLVLYGIALA TEGWGVVASL IIYPPFAGAA1080
 1081 VSAITLVVAF GFAVSRPCLT LEMMEVAVRF LSKDTIVQAI SRSATKTRNA LSGTYSAPQR1140
 1141 SASSAALLVG DPSAMRDKAG NFVLPRDDVM KLRDRLRNEE RVAGSIFYKM QCRKGFRHEP1200
 1201 PTNVDYRRDM CAHARVLALE EAIDTEWVYM WDKFGGYLLL LLGLTAKAER VQDEVRLRLF1260
 1261 LDSIGFSDLS ARKISKWKPE DRRQFEIIQE SYLREKEMEE ESLMQRREEE GRGKERRKAL1320
 1321 LEKEERKWKE IEASLIPSIP NAGSREAAAM AAAIRAVGGD SVLEDSFARE RVSGIARRIR1380
 1381 TAQLERRAQQ TGISGAVCVL DDEPMISGKH CGQMDSSVCQ SQKISFSVTA MIQSDSGPVC1440
 1441 LFGTEFQKKV CWEILVAGSE QGIEAGQVGL RLITKGERQT TVAREWYIGA TSITDGRWHT1500
 1501 VTITIDADAG EATCYIDGGF DGYQNGLPLS IGSAIWEQGA EVWLGVRPPI DVDAFGRSDS1560
 1561 DGVESKMHIM DVFLWGKCLS EEEAASLHAA IGMADLDMID LSDDNWQWTD SPPRVDGWDS1620
 1621 DPADVDLYDR DDVDWDGQYS SGRKRRSGRD FVMSVDSFAR RHRKPRMETQ EDINQRMRSV1680
 1681 ELAVKEALSA RGDKQFTDQE FPPNDRSLFV DTQNPPSKLQ VVSEWMRPDS IVKENGSDSR1740
 1741 PCLFSGDANP SDVCQGRLGD CWFLSAVAVL TEVSRISEVI ITPEYNEEGI YTVRFCIQGE1800
 1801 WVPVVIDDWI PCESPGKPAF ATSRKLNELW VSMVEKAYAK LHGSYEALEG GLVQDALVDL1860
 1861 TGGAGEEIDL RSAQAQIDLA SGRLWSQLLR FKQEGFLLGA GSPSGSDVHV SSSGIVQGHA1920
 1921 YSVLQVREVD GHRLVQIRNP WANEVEWNGP WSDSSPEWTD RMKHKLKHVP QSKEGIFWMS1980
 1981 WQDFQIHFRS IYVCRVYPRE MRYSVNGQWR GYSAGGCQDY SSWHQNPQFR LRATGSDASL2040
 2041 PIHVFITLTQ GVGFSRTTPG FRNYQSSHDS QLFYIGLRIL KTRGRRAAYN IFLHESVGGT2100
 2101 DYVNSREISC EMVLDPDPKG YTIVPTTIHP GEEAPFVLSV FTKASIVLEA L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..145] MSA 1.003945 View MSA. No confident structure predictions are available.
    2 View Details [146..414] deduced N/A No confident structure predictions are available.
    3 View Details [415..557] deduced N/A No confident structure predictions are available.
    4 View Details [558..801] deduced N/A No confident structure predictions are available.
    5 View Details [802..995] deduced N/A No confident structure predictions are available.
    6 View Details [996..1137] deduced N/A No confident structure predictions are available.
    7 View Details [1138..1340] deduced N/A No confident structure predictions are available.
    8 View Details [1341..1531] deduced N/A No confident structure predictions are available.
    9 View Details [1532..1653] PSI-BLAST 9.0 No description for 2fe0A was found.
    10 View Details [1654..2151] PSI-BLAST 135.0 Calpain large subunit, C-terminal domain (domain IV); Calpain large subunit, middle domain (domain III); Calpain large subunit, catalytic domain (domain II)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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