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Protein Overview: gi|20198279, gi|...

General Information:
Name(s) found: gi|20198279 [NCBI NR]
gi|15226090 [NCBI NR]
Description(s) found:
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  • gi|20198279|gb|AAM15495.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15226090|ref|NP_178786.1| cytochrome c oxidase subunit II, putative [Arabidopsis thaliana] [NCBI NR]
  • hypothetical protein [Arabidopsis thaliana]gi|15226090|ref|NP_178786.1| cytochrome c oxidase subunit II, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Cytochrome c oxidase subunit II [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | cytochrome c oxidase subunit II, putative | chr2:3346948-3347823 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • copper ion binding / cytochrome-c oxidase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Cytochrome C oxidase subunit II-like, transmembrane domain | chr2:3346951-3347826 FORWARD LENGTH=291 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 291 amino acids

    Gene Ontology:
    Cellular Component: membrane [ISS]
    integral to membrane [IEA]
    Biological Process: respiratory electron transport chain [IEA]
    electron transport chain [IEA]
    Molecular Function: cytochrome-c oxidase activity [IEA][ISS]
    copper ion binding [IEA][ISS]
    electron carrier activity [IEA]
    heme binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVLKWLFLT ISPCDAAEPW QLGSQDAATP IMQGIIDLHH DIFFFLILIL VFVLWILVRA  60
   61 LWHFHYKKNA IPQRIVHGTT IEILRTIFPC FISIFIVEPS FALALDDAAE ALFPNTAPTP 120
  121 SNTSSSEDSF GLSVLSEPWP ITRNLGLESS ICNRIRLLEA ANSPFLLGKE KGQYWGEIQE 180
  181 CLYNVSEQRE YYRLLDFENR DLQIRERKHS CLEVFRGVLL RNPYLEERAA YSPQEAFFDF 240
  241 LNERRDALDI SNPGSSPAEM DRLEILFLGE IERDLLRRGD ESLYIKQLLG D

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..193] PSI-BLAST 47.69897 Cytochrome c oxidase; Mitochondrial cytochrome c oxidase, subunit II
    2 View Details [194..291] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle