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Protein Overview: NU98A_ARATH

General Information:
Name(s) found: NU98A_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • Nuclear pore complex protein NUP98A OS=Arabidopsis thaliana GN=NUP98A PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1041 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    nuclear pore [IEA]
    Biological Process: transport [IEA]
    Molecular Function: transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGSSNPFGQ SSGTSPFGSQ SLFGQTSNTS SNNPFAPATP FGTSAPFAAQ SGSSIFGSTS  60
   61 TGVFGAPQTS SPFASTPTFG ASSSPAFGNS TPAFGASPAS SPFGGSSGFG QKPLGFSTPQ 120
  121 SNPFGNSTQQ SQPAFGNTSF GSSTPFGATN TPAFGAPSTP SFGATSTPSF GASSTPAFGA 180
  181 TNTPAFGASN SPSFGATNTP AFGASPTPAF GSTGTTFGNT GFGSGGAFGA SNTPAFGASG 240
  241 TPAFGASGTP AFGASSTPAF GASSTPAFGA SSTPAFGGSS TPSFGASNTS SFSFGSSPAF 300
  301 GQSTSAFGSS AFGSTPSPFG GAQASTPTFG GSGFGQSTFG GQQGGSRAVP YAPTVEADTG 360
  361 TGTQPAGKLE SISAMPAYKE KNYEELRWED YQRGDKGGPL PAGQSPGNAG FGISPSQPNP 420
  421 FSPSPAFGQT SANPTNPFSS STSTNPFAPQ TPTIASSSFG TATSNFGSSP FGVTSSSNLF 480
  481 GSGSSTTTSV FGSSSAFGTT TPSPLFGSSS TPGFGSSSSI FGSAPGQGAT PAFGNSQPST 540
  541 LFNSTPSTGQ TGSAFGQTGS AFGQFGQSSA PAFGQNSIFN KPSTGFGNMF SSSSTLTTSS 600
  601 SSPFGQTMPA GVTPFQSAQP GQASNGFGFN NFGQNQAANT TGNAGGLGIF GQGNFGQSPA 660
  661 PLNSVVLQPV AVTNPFGTLP AMPQISINQG GNSPSIQYGI SSMPVVDKPA PVRISSLLTS 720
  721 RHLLHRRVRL PARKYRPGEN GPKVPFFTDD EESSSTPKAD ALFIPRENPR ALVIRPVQQW 780
  781 SSRDKSILPK EQRPTAPLHD NGKSPDMATD AANHDRNGNG ELGATGERIH TSVNANQKPN 840
  841 GTTRSDQASE KERPYKTLSG HRAGEAAIVY EHGADIEALM PKLRQSDYFT EPRIQELAAK 900
  901 ERADPGYCRR VRDFVVGRHG YGSIKFMGET DVRRLDLESL VQFNTREVIV YMDESKKPAV 960
  961 GQGLNKPAEV TLLNIKCIDK KTGKQFTEGE RVEKYKMMLK KKAEAQGAEF VSFDPVKGEW1020
 1021 KFRVEHFSSY KLGDEDEEDG V

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..936] PSI-BLAST 111.0 No description for 1y0fB was found.
    2 View Details [937..1041] PSI-BLAST 55.30103 No description for 2q5xA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.65

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle