YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|27754278, gi|...

General Information:
Name(s) found: gi|27754278 [NCBI NR]
gi|18423551 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|27754278|gb|AAO22592.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18423551|ref|NP_568798.1| nucleotidyltransferase family protein [Arabidopsis thaliana] [NCBI NR]
  • unknown protein [Arabidopsis thaliana]gi|18423551|ref|NP_568798.1| nucleotidyltransferase family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • | Symbols: | nucleotidyltransferase family protein | chr5:21843959-21847084 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • nucleic acid binding / nucleotidyltransferase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Nucleotidyltransferase family protein | chr5:21826733-21829858 FORWARD LENGTH=530 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Nucleotidyltransferase family protein OS=Arabidopsis thaliana GN=At5g53770 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 530 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: nucleic acid binding [ISS]
    nucleotidyltransferase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDSDAKTEA PAFVYDTLPP LSFSDSNQSP PPTHEESHQY SVFRKEISDF PDDTTPVESA  60
   61 TVDFFSLDVE GETTENGVEP VTPVVVASKK KSKKRKKDEE PRLESNWFSE NSFSKIPMLQ 120
  121 LHKEIVDFCD FLLPTQAEKA ERDAAVESVS SVIKYIWPSC KVEVFGSYKT GLYLPTSDID 180
  181 VVILESGLTN PQLGLRALSR ALSQRGIAKN LLVIAKARVP IIKFVEKKSN IAFDLSFDME 240
  241 NGPKAAEFIQ DAVSKLPPLR PLCLILKVFL QQRELNEVYS GGIGSYALLA MLIAFLKYLK 300
  301 DGRSAPEHNL GVLLVKFFDF YGRKLNTADV GISCKMGGSF FSKYNKGFLN RARPSLISIE 360
  361 DPQTPENDIG KSSFNYFQIR SAFAMALSTL TNTKAILSLG PNRSILGTII RPDRVLSERK 420
  421 GGQNGDVTFN SLLPGAGEPL PLESNGKTNG GLFCNWELEE EEEEGSFPRG NDITPVVDTP 480
  481 GKKSKESSRK KKKKSKKNKE VDEDDEEEGT STKKKKKKRR RNIVGLTWTY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..101] deduced N/A No confident structure predictions are available.
    2 View Details [102..446] PSI-BLAST 76.522879 Poly(A) polymerase, middle domain; Poly(A) polymerase N-terminal, catalytic domain; Poly(A) polymerase, C-terminal domain
    3 View Details [447..530] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.222270543382941 bayes_pls_golite062009
  • transferase activity
    		•  0.00393984128503999 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.54

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle