| Protein: | gi|27754278, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 530 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|27754278, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
398.0 | [0..1] | [530..1] |
|
Region A: Residues: [1-101] |
1 11 21 31 41 51
| | | | | |
1 MEDSDAKTEA PAFVYDTLPP LSFSDSNQSP PPTHEESHQY SVFRKEISDF PDDTTPVESA 60
61 TVDFFSLDVE GETTENGVEP VTPVVVASKK KSKKRKKDEE P
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [102-446] |
1 11 21 31 41 51
| | | | | |
1 RLESNWFSEN SFSKIPMLQL HKEIVDFCDF LLPTQAEKAE RDAAVESVSS VIKYIWPSCK 60
61 VEVFGSYKTG LYLPTSDIDV VILESGLTNP QLGLRALSRA LSQRGIAKNL LVIAKARVPI 120
121 IKFVEKKSNI AFDLSFDMEN GPKAAEFIQD AVSKLPPLRP LCLILKVFLQ QRELNEVYSG 180
181 GIGSYALLAM LIAFLKYLKD GRSAPEHNLG VLLVKFFDFY GRKLNTADVG ISCKMGGSFF 240
241 SKYNKGFLNR ARPSLISIED PQTPENDIGK SSFNYFQIRS AFAMALSTLT NTKAILSLGP 300
301 NRSILGTIIR PDRVLSERKG GQNGDVTFNS LLPGAGEPLP LESNG
|
| Detection Method: | |
| Confidence: | 76.522879 |
| Match: | 1f5aA |
| Description: | Poly(A) polymerase, middle domain; Poly(A) polymerase N-terminal, catalytic domain; Poly(A) polymerase, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.222270543382941 | bayes_pls_golite062009 |
| transferase activity | 0.00393984128503999 | bayes_pls_golite062009 |
|
Region A: Residues: [447-530] |
1 11 21 31 41 51
| | | | | |
1 KTNGGLFCNW ELEEEEEEGS FPRGNDITPV VDTPGKKSKE SSRKKKKKSK KNKEVDEDDE 60
61 EEGTSTKKKK KKRRRNIVGL TWTY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
