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Protein Overview: gi|22331783, gi|...

General Information:
Name(s) found: gi|22331783 [NCBI NR]
gi|20147224 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|22331783|ref|NP_680128.1| glycoside hydrolase family 2 protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20147224|gb|AAM10327.1| At3g54435 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 1107 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    Biological Process: carbohydrate metabolic process [IEA]
    Molecular Function: catalytic activity [IEA]
    cation binding [IEA]
    carbohydrate binding [IEA]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEA]
    beta-galactosidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSLATQMIL PSENGYRVWE DQTLFKWRKR DPHVTLRCHE SVQGALRYWY QRNNVDLTVS  60
   61 KSAVWNDDAV QAALDSAAFW VDGLPFVKSL SGYWKFFLAP KPANVPDKFY DAAFSDSDWN 120
  121 ALQVPSNWQC HGFDRPIYTN VVYPFPNDPP YVPEDNPTGC YRTYFQIPKE WKDRRILLHF 180
  181 EAVDSAFFAW INGNPVGYSQ DSRLPAEFEI SDYCYPWDSG KQNVLAVQVF RWSDGSYLED 240
  241 QDHWWLSGIH RDVLLLAKPK VFIADYFFKS KLADDFSYAD IQVEVKIDNM QESSKDLVLS 300
  301 NFIIEAAIFD TKNWYNSEGF SCELSPKVAN LKLNPSPSPT LGFHGYLLEG KLDSPNLWSA 360
  361 EQPNVYILVL TLKDTSGKVL DSESSIVGIR QVSKAFKQLL VNGHPVVIKG VNRHEHHPRV 420
  421 GKTNIEACMV KDLIMMKEYN INAVRNSHYP QHPRWYELCD LFGMYMIDEA NIETHGFDLS 480
  481 GHLKHPAKEP SWAAAMLDRV VGMVERDKNH TCIISWSLGN EAGYGPNHSA MAGWIREKDP 540
  541 SRLVHYEGGG SRTSSTDIVC PMYMRVWDII KIALDQNESR PLILCEYQHA MGNSNGNIDE 600
  601 YWEAIDNTFG LQGGFIWDWV DQGLLKLGSD GIKRWAYGGD FGDQPNDLNF CLNGLIWPDR 660
  661 TPHPALHEVK HCYQPIKVSL TDGMIKVANT YFFNTTEELE FSWTIHGDGL ELGSGTLSIP 720
  721 VIKPQNSFEM EWKSGPWFSF WNDSNAGELF LTINAKLLNL TRSLEAGHLL SSTQIPLPAK 780
  781 GQIIPQAIKK TDTSITCETV GDFIKISQKD SWELMVNVRK GTIEGWKIQG VLLMNEAILP 840
  841 CFWRAPTDND KGGGDSSYFS RWKAAQLDNV EFLVESCSVK SITDKSVEIE FIYLGSSASG 900
  901 SSKSDALFKV NVTYLIYGSG DIITNWFVEP NSDLPPLPRV GIEFHIEKTL DRVEWYGKGP 960
  961 FECYPDRKAA AHVAIYEHNV GDMHVPYIVP GENGGRTDVR WVTFRNKDGV GIYASTYGSS1020
 1021 SLMQMNASYY TTGELHRATH EEDLIKGQNI EVHLDHKHMG LGGDDSWTPC VHDKFLIPPA1080
 1081 QYSFSLRLCP ITASTSGLNI YKDQLPC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..1107] PSI-BLAST 1000.0 beta-Galactosidase, domains 2 and 4; beta-Galactosidase; beta-Galactosidase, domain 5; beta-Galactosidase, domain 3


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle