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Protein Overview: gi|22329926, gi|...

General Information:
Name(s) found: gi|22329926 [NCBI NR]
gi|20148515 [NCBI NR]
gi|17065472 [NCBI NR]
Description(s) found:
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  • gi|22329926|ref|NP_174638.2| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20148515|gb|AAM10148.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|17065472|gb|AAL32890.1| Unknown protein [Arabidopsis thaliana] [NCBI NR]
  • unknown protein [Arabidopsis thaliana]gi|17065472|gb|AAL32890.1| Unknown protein [Arabidopsis thaliana]gi|22329926|ref|NP_174638.2| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G29240.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G29240.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64828.1); contains InterPro domain Protein of [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G29240.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G29240.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64828.1); contains InterPro domain Protein of unknown function DUF179 (InterPro:IPR003774) | chr1:12244779-12246014 REVERSE [TAIR_A_Thaliana_na_04-12-2008_reversed.fasta]
  • | Symbols: | Protein of unknown function (DUF179) | chr1:12244799-12246034 REVERSE LENGTH=325 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Putative uncharacterized protein At1g33780 OS=Arabidopsis thaliana GN=F14M2.10 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 325 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    chloroplast thylakoid lumen [ISS]
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLWTLQLKD VTIRNPIFSS SIPEKSSSFS RKLCELEFRF LNRKVSASPY RSLVVRATSK  60
   61 KSNDDSSSPG DASQENKPSN GNKSGDSAAP KSFGLNTDWR EFRANLFMKE QEEKAEAEGH 120
  121 ESEPIGLKWA HPIPFPETGC VLVATEKLDG YRTFARTVVL LLRAGTRHPQ EGPFGVVINR 180
  181 PLHKNIKHMK STKTELATTF SECSLYFGGP LEASMFLLKT GDKTKIPGFE EVMPGLNFGT 240
  241 RNSLDEAAVL VKKGVLKPQE FRFFVGYAGW QLDQLREEIE SDYWHVAACS SDLICGASSE 300
  301 NLWEEILQLM GGQYSELSRK PKLDI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..134] deduced N/A No confident structure predictions are available.
    2 View Details [135..325] PSI-BLAST 64.045757 No description for 2hafA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle