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Protein Overview: gi|18406673, gi|...

General Information:
Name(s) found: gi|20148295 [NCBI NR]
gi|18406673 [NCBI NR]
gi|15451230 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|20148295|gb|AAM10038.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18406673|ref|NP_564755.1| radical SAM domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15451230|gb|AAK96886.1| Unknown protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 458 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEA]
    Biological Process: rRNA processing [IEA]
    Molecular Function: RNA methyltransferase activity [IEA]
    catalytic activity [IEA]
    iron-sulfur cluster binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTTMRRLGI ITLTNSAAVV TPSLLSSTAA FPGTLTLPSP LLSDRLTNSI LFHESRSLSF  60
   61 SCFSSSSSSS AAYLPSLEEY PSAKGSVKRD DNQKVVLKGM TYASLQEWVQ SHGFRPGQAL 120
  121 MLWKRLYKDN IWANNVDELE GLNKDLKRMI SEHAEFGALS FKDIRSASDG TRKILFTLDD 180
  181 GLVIETVVIP CDRGRTTVCV SSQVGCAMNC QFCYTGRMGL KRNLTTAEIV EQAVYARRLL 240
  241 SHEVGSITNV VFMGMGEPFH NIDNVIKAAN IMVDENGLHF SPRKVTVSTS GLVPQLKRFL 300
  301 RESNCALAVS LNATTDEVRN WIMPINRKYK LSLLLETLRE GLSSRHKYKV LFEYVMLAGV 360
  361 NDSMDDARRL VELVQGIPCK INLIQFNPHS GSQFIQTEED KMIKFRNVLA EGGCTVLMRF 420
  421 SRGNDQMAAC GQLGMIGAVQ APVMRVPEQF RTALKASV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..181] deduced N/A No confident structure predictions are available.
    2 View Details [182..458] PSI-BLAST 33.09691 Structure of the S-adenosylmethionine dependent Enzyme MoaA

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.48331922124015 bayes_pls_golite062009
  • transferase activity
    		•  0.685192555939835 bayes_pls_golite062009
  • binding
    		•  0.131941651473395 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle