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Protein Overview: HDG2_ARATH

General Information:
Name(s) found: HDG2_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Homeobox-leucine zipper protein HDG2 OS=Arabidopsis thaliana GN=HDG2 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 721 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA][ISS]
    Biological Process: regulation of transcription, DNA-dependent [ISS]
    trichome morphogenesis [IMP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFEPNMLLAA MNNADSNNHN YNHEDNNNEG FLRDDEFDSP NTKSGSENQE GGSGNDQDPL  60
   61 HPNKKKRYHR HTQLQIQEME AFFKECPHPD DKQRKQLSRE LNLEPLQVKF WFQNKRTQMK 120
  121 NHHERHENSH LRAENEKLRN DNLRYREALA NASCPNCGGP TAIGEMSFDE HQLRLENARL 180
  181 REEIDRISAI AAKYVGKPVS NYPLMSPPPL PPRPLELAMG NIGGEAYGNN PNDLLKSITA 240
  241 PTESDKPVII DLSVAAMEEL MRMVQVDEPL WKSLVLDEEE YARTFPRGIG PRPAGYRSEA 300
  301 SRESAVVIMN HVNIVEILMD VNQWSTIFAG MVSRAMTLAV LSTGVAGNYN GALQVMSAEF 360
  361 QVPSPLVPTR ETYFARYCKQ QGDGSWAVVD ISLDSLQPNP PARCRRRASG CLIQELPNGY 420
  421 SKVTWVEHVE VDDRGVHNLY KHMVSTGHAF GAKRWVAILD RQCERLASVM ATNISSGEVG 480
  481 VITNQEGRRS MLKLAERMVI SFCAGVSAST AHTWTTLSGT GAEDVRVMTR KSVDDPGRPP 540
  541 GIVLSAATSF WIPVPPKRVF DFLRDENSRN EWDILSNGGV VQEMAHIANG RDTGNCVSLL 600
  601 RVNSANSSQS NMLILQESCT DPTASFVIYA PVDIVAMNIV LNGGDPDYVA LLPSGFAILP 660
  661 DGNANSGAPG GDGGSLLTVA FQILVDSVPT AKLSLGSVAT VNNLIACTVE RIKASMSCET 720
  721 A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..129] PSI-BLAST 19.045757 Paired protein
    2 View Details [130..216] deduced N/A No confident structure predictions are available.
    3 View Details [217..476] FFAS03 2.71 No description for 2r55A was found.
    4 View Details [477..606] deduced N/A No confident structure predictions are available.
    5 View Details [607..721] MSA 3.061986 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle