YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SPNS1_ARATH

General Information:
Name(s) found: SPNS1_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
SHOW ALL
  • Probable sphingolipid transporter spinster homolog 1 OS=Arabidopsis thaliana GN=At5g65687 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 492 amino acids

    Gene Ontology:
    Cellular Component: membrane [ISS]
    plasma membrane [IDA]
    Biological Process: biological_process [ND]
    Molecular Function: carbohydrate transmembrane transporter activity [ISS]
    sugar:hydrogen symporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRVGQRDSP AKEEAPPATK KRFLTPGRFV TILCIINLIN YVDRGVIASN GVNGSSKVCD  60
   61 AKGVCSAGTG IQGEFNLTNF EDGLLSSAFM VGLLVASPIF AGLSKRFNPF KLIGVGLTVW 120
  121 TIAVIGCGFS YNFWMIAVFR MFVGVGEASF ISLAAPYIDD SAPVARKNFW LGLFYMCIPA 180
  181 GVALGYVFGG YIGNHLGWRW AFYIEAIAMA VFVILSFCIK PPQQLKGFAD KDSKKPSTSI 240
  241 ETVAPTDAEA SQIKTKTPKS KNLVVLFGKD LKALFSEKVF IVNVLGYITY NFVIGAYSYW 300
  301 GPKAGFGIYK MKNADMIFGG LTIICGIIGT LGGSYVLDRI NATLSNTFKL LAASTLLGAA 360
  361 FCFTAFLMKN MYAFIALFAV GEILIFAPQA PVNFVCLHCV RPNLRPLSMA SSTVLIHILG 420
  421 DVPSSPLYGK MQDHLKNWRK STLIITSILF LAAIIWGIGI FMNSVDRSNE VSEDDEVEED 480
  481 KLESKTENST LA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..492] PSI-BLAST 33.154902 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.118997796261274 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle