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Protein Overview: gi|27363430, gi|...

General Information:
Name(s) found: gi|27363430 [NCBI NR]
gi|18390691 [NCBI NR]
gi|15529151 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|27363430|gb|AAO11634.1| At1g06800/F4H5_10 [Arabidopsis thaliana] [NCBI NR]
  • gi|18390691|ref|NP_563772.1| lipase class 3 family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15529151|gb|AAK97670.1| At1g06800/F4H5_10 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 444 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: lipid metabolic process [IEA]
    Molecular Function: triglyceride lipase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATIPSHNLR PHTTNQRTQY SLSFRPHFSR STLITFPARS SPARAMSRTD EEASISTRLE  60
   61 QESYGLTTAE DIRRRDGEAK ESKRLRDTWR KIQGEDDWAG LMDPMDPVLR SELIRYGEMA 120
  121 QACYDAFDFD PFSRYCGSCR FTRRHLFDSL GIIDSGYEVA RYLYATSNIN LPNFFSKSRW 180
  181 SKVWSKNANW MGYVAVSDDN EATRCRLGRR DIAIAWRGTV TRLEWIADLK DFLKPVSGNG 240
  241 FRCPDPAVKA ESGFLDLYTD KDTSCNFSKF SAREQVLTEV KRLVERYGDE EGEELSITVT 300
  301 GHSLGGALAV LSAYDVAEMG VNRTRKGKVI PVTAFTYGGP RVGNIRFKER IEKLGVKVLR 360
  361 VVNEHDVVAK SPGLFLNERA PQALMKLAGG LPWCYSHVGE MLPLDHQKSP FLKPTVDLST 420
  421 AHNLEALLHL LDGSVILLFI TFLL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..102] MSA 1.049997 View MSA. No confident structure predictions are available.
    2 View Details [103..149] MSA 1.20498 View MSA. No confident structure predictions are available.
    3 View Details [150..444] PSI-BLAST 52.69897 CATALYSIS AT THE INTERFACE: THE ANATOMY OF A CONFORMATIONAL CHANGE IN A TRIGLYCERIDE LIPASE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • catalytic activity
    		•  0.866238607554457 bayes_pls_golite062009
  • hydrolase activity
    		•  0.52702612560045 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.77

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle