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View Structure Prediction Details

Protein: gi|27363430, gi|...
Organism: Arabidopsis thaliana
Length: 444 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|27363430, gi|....

Description E-value Query
Range
Subject
Range
PLA15_ARATH - Phospholipase A1-Igamma1, chloroplastic OS=Arabidopsis thaliana GN=At1g06800 PE=1 SV=2
488.0 [0..1] [434..1]

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Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATIPSHNLR PHTTNQRTQY SLSFRPHFSR STLITFPARS SPARAMSRTD EEASISTRLE  60
   61 QESYGLTTAE DIRRRDGEAK ESKRLRDTWR KIQGEDDWAG LM

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [103-149]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPMDPVLRSE LIRYGEMAQA CYDAFDFDPF SRYCGSCRFT RRHLFDS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [150-444]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGIIDSGYEV ARYLYATSNI NLPNFFSKSR WSKVWSKNAN WMGYVAVSDD NEATRCRLGR  60
   61 RDIAIAWRGT VTRLEWIADL KDFLKPVSGN GFRCPDPAVK AESGFLDLYT DKDTSCNFSK 120
  121 FSAREQVLTE VKRLVERYGD EEGEELSITV TGHSLGGALA VLSAYDVAEM GVNRTRKGKV 180
  181 IPVTAFTYGG PRVGNIRFKE RIEKLGVKVL RVVNEHDVVA KSPGLFLNER APQALMKLAG 240
  241 GLPWCYSHVG EMLPLDHQKS PFLKPTVDLS TAHNLEALLH LLDGSVILLF ITFLL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 52.69897
Match: 4tglA
Description: CATALYSIS AT THE INTERFACE: THE ANATOMY OF A CONFORMATIONAL CHANGE IN A TRIGLYCERIDE LIPASE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.866238607554457 bayes_pls_golite062009
hydrolase activity 0.52702612560045 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle