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Protein Overview: YAB3_ARATH

General Information:
Name(s) found: YAB3_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75267403|sp|Q9XFB1.1|YAB3_ARATH RecName: Full=Axial regulator YABBY 3 [NCBI NR]
  • gi|4928753|gb|AAD33717.1|AF136540_1 YABBY3 [Arabidopsis thaliana] [NCBI NR]
  • gi|27363318|gb|AAO11578.1| At4g00180/F6N15_22 [Arabidopsis thaliana] [NCBI NR]
  • gi|18411242|ref|NP_567154.1| YAB3 (YABBY3); protein binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|14335014|gb|AAK59771.1| AT4g00180/F6N15_22 [Arabidopsis thaliana] [NCBI NR]
  • Axial regulator YABBY 3 OS=Arabidopsis thaliana GN=YAB3 PE=1 SV=1 [Swiss-Prot]
  • At4g00180/F6N15_22 [Arabidopsis thaliana]gi|4928753|gb|AAD33717.1| YABBY3 [Arabidopsis thaliana]gi|14335014|gb|AAK59771.1| AT4g00180/F6N15_22 [Arabidopsis thaliana]gi|18411242|ref|NP_567154.1| axial regulator YABBY3 (YABBY3) [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Axial regulator YABBY3 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: YAB3 | YAB3 (YABBY3); transcription factor | chr4:72804-75089 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At4g00180/F6N15_22 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AT4g00180/F6N15_22 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • YAB3; transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Axial regulator YABBY3 [nr-271106-contam.fasta]
  • YABBY3 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: YAB3 | Plant-specific transcription factor YABBY family protein | chr4:72804-75089 REVERSE LENGTH=240 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 240 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: fruit development [IMP]
    regulation of transcription [TAS]
    abaxial cell fate specification [IGI]
    Molecular Function: transcription factor activity [ISS]
    protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSMSMSSSS APAFPPDHFS STDQLCYVHC SFCDTVLAVS VPPSSLFKTV TVRCGHCSNL  60
   61 LSVTVSMRAL LLPSVSNLGH SFLPPPPPPP PPNLLEEMRS GGQNINMNMM MSHHASAHHP 120
  121 NEHLVMATRN GRSVDHLQEM PRPPPANRPP EKRQRVPSAY NRFIKEEIQR IKAGNPDISH 180
  181 REAFSAAAKN WAHFPHIHFG LMADHPPTKK ANVRQQEGED GMMGREGFYG SAANVGVAHN 240
  241

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..143] Pfam 44.853872 No description for PF04690.4 was found. No confident structure predictions are available.
    2 View Details [144..240] FFAS03 1.34 Solution structure of the HMG_box domain of thymus high mobility group box protein TOX from mouse


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.75

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle