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Protein Overview: gi|27311575, gi|...

General Information:
Name(s) found: gi|27311575 [NCBI NR]
gi|18420952 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|27311575|gb|AAO00753.1| eukaryotic translation initiation factor - like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18420952|ref|NP_568477.1| EIF3B-2 (EUKARYOTIC TRANSLATION INITIATION FACTOR 3B-2); nucleic acid binding / protein binding / translation initiation factor [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 714 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    cytoplasm [IDA]
    cytosol [IDA]
    Biological Process: translational initiation [IEA]
    Molecular Function: nucleic acid binding [ISS]
    translation initiation factor activity [ISS][TAS]
    protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVVDIDVL TAQLGINWSD VNLDSIQLPP GNDFGIESDD ESVYQDDQSE FDTGFGNIIV  60
   61 VDHLPVVPKE KFEKLEGVVK KIYNQLGVIK ENGLLMPVDP DTKMTLGYCF IEFNTPQEAQ 120
  121 NAKEKSHGYK LDKSHIFAVN MFDDFDRLMN VKEEWEPPQE RPYVPGENLQ KWLTDDKARD 180
  181 QLVIRFGHDT EVYWNDARQK KPEPVHKRSY WTESYVQWSP IGTYLVTLHK QGAAVWGGAD 240
  241 TFTRLMRYQH SMVKLVDFSP GEKYLVTYHS QEPSNPRDAS KVEIKVFDVR TGRMMRDFKG 300
  301 SADEFSIGGP GGVAGASWPV FRWAGGKDDK YFAKLSKNTI SVYETETFSL IDKKSMKVDN 360
  361 VVDICWSPTD SILSLFVPEQ GGGNQPAKVA LVQIPSKVEL RQKNLFSVSD CKMYWQSSGE 420
  421 YLAVKVDRYT KTKKSTYSGF ELFRIKERDI PIEVLELDNK NDKIIAFAWE PKGHRFAVIH 480
  481 GDQPRPDVSF YSMKTAQNTG RVSKLATLKA KQANALFWSP TGKYIILAGL KGFNGQLEFF 540
  541 NVDELETMAT AEHFMATDIE WDPTGRYVAT SVTTVHEMEN GFTIWSFNGN MVYRILKDHF 600
  601 FQLAWRPRPA SFLTAEKEEE IAKNLRNYSK RYEAEDQDVS LLLSEQDREK RRALNEEWQK 660
  661 WVMQWKSLHE EEKLVRQNLR DGEVSDVEED EYEAKEVEFE DLIDVTEEIV QELM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..150] PSI-BLAST 12.69897 No description for 2nlwA was found.
    2 View Details [151..238] deduced N/A Confident ab initio structure predictions are available.
    3 View Details [239..588] PSI-BLAST 60.39794 PAF-AH Holoenzyme: Lis1/Alfa2
    4 View Details [589..632] MSA 1.708994 View MSA. No confident structure predictions are available.
    5 View Details [633..714] deduced N/A Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle