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Protein Overview: SBH2_ARATH

General Information:
Name(s) found: SBH2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|24797014|gb|AAN64519.1| At1g14290/F14L17_4 [Arabidopsis thaliana] [NCBI NR]
  • gi|18394095|ref|NP_563944.1| SBH2 (SPHINGOID BASE HYDROXYLASE 2); catalytic/ sphingosine hydroxylase [Arabidopsis thaliana] [NCBI NR]
  • gi|13605750|gb|AAK32868.1|AF361856_1 At1g14290/F14L17_4 [Arabidopsis thaliana] [NCBI NR]
  • Sphinganine C4-monooxygenase 2 OS=Arabidopsis thaliana GN=SBH2 PE=1 SV=1 [Swiss-Prot]
  • At1g14290/F14L17_4 [Arabidopsis thaliana]gi|18394095|ref|NP_563944.1| acid phosphatase, putative [Arabidopsis thaliana]gi|24797014|gb|AAN64519.1| At1g14290/F14L17_4 [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Acid phosphatase [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | acid phosphatase, putative | chr1:4880302-4881779 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • catalytic [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At1g14290/F14L17_4 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: SBH2 | sphingoid base hydroxylase 2 | chr1:4880307-4881784 REVERSE LENGTH=259 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Sphinganine C(4)-monooxygenase 2 OS=Arabidopsis thaliana GN=SBH2 PE=1 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 259 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum [IDA]
    Golgi apparatus [IDA]
    Biological Process: photomorphogenesis [IMP]
    sphingoid biosynthetic process [IMP]
    Molecular Function: catalytic activity [ISS]
    sphingosine hydroxylase activity [IGI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSFVISDEF LGTFVPILVY WVYSGMYICL GSLDKYRLHS KIDEDEKNLV SKSAVVKGVL  60
   61 LQQTLQAIIS VILFKITGSD ADAATTQQFS ILLLARQFII AMLVIDTWQY FIHRYMHLNK 120
  121 FLYKHIHSQH HRLIVPYSYG ALYNHPLEGL LLDTIGGALS FLFSGMSPRT AIFFFSFATI 180
  181 KTVDDHCGLW LPGNPFHIFF SNNSAYHDVH HQLYGTKYNF SQPFFVMWDR ILGTYLPYSL 240
  241 EKRANGGFET RPIKVSKDE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..75] MSA 2.434997 View MSA. No confident structure predictions are available.
    2 View Details [76..259] Pfam 35.30103 No description for PF04116.4 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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