Protein Overview: gi|3171996

General Information:
Name(s) found:	gi\|3171996 [NCBI NR]
Description(s) found: SHOW ONLY BEST	gi\|3171996\|emb\|CAA06509.1\| collagen alpha 1 (V) [Rattus norvegicus] [NCBI NR] collagen alpha 1 (V) [Rattus norvegicus] [nrdb_11152004_Chlamydomonas] Collagen alpha 1 (V) (Fragment) OS=Rattus norvegicus GN=Col5a1 [011711_HMR.fasta]
Organism:	Rattus norvegicus
Length:	200 amino acids
Gene Ontology:
Cellular Component:	basement membrane [UNKNOWN][IEA] collagen [UNKNOWN][IEA] extracellular matrix [UNKNOWN] extracellular region [IEA] collagen type V [UNKNOWN][TAS]
Biological Process:	biological_process [ND] cell adhesion [UNKNOWN][IEA] skin development [UNKNOWN][IEA] fibril organization [UNKNOWN][IEA] heart morphogenesis [UNKNOWN][IEA] eye morphogenesis [UNKNOWN][IEA] blood vessel development [UNKNOWN][IEA] integrin biosynthetic process [UNKNOWN][IEA] collagen fibril organization [UNKNOWN][IEA] collagen biosynthetic process [UNKNOWN][IEA] cell migration [UNKNOWN] wound healing, spreading of epidermal cells [UNKNOWN][IEA] regulation of cellular component organization [UNKNOWN][IEA]
Molecular Function:	protein binding [UNKNOWN][IEA] proteoglycan binding [UNKNOWN][IEA] heparin binding [UNKNOWN][IDA] extracellular matrix structural constituent [UNKNOWN][IEA] platelet-derived growth factor binding [UNKNOWN][IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CKDLQLCHPD FPDGEYWVDP NQGCSRDSFK VYCNFTAGGS TCVFPDKKSE GARITSWPKE  60
   61 NPGSWFSEFK RGKLLSYVDA EGNPVGVVQM TFLRLLSASA QQNITYNCYQ SVAWQDAATG 120
  121 SYDKAIRFLG SNDEEMSYDN NPYIRALVDG CATKKGYQKT VLEIDTPKVE QVPIVDIMFT 180
  181 DFGEASQKFG FEVGPPCFLG

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: gi|3171996

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: