General Information: |
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Name(s) found: |
PUB12_ORYSJ
[Swiss-Prot]
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Description(s) found:
Found 7 descriptions. SHOW ALL |
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Organism: | Oryza sativa Japonica Group |
Length: | 611 amino acids |
Gene Ontology: |
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Cellular Component: | NONE FOUND |
Biological Process: | NONE FOUND |
Molecular Function: | NONE FOUND |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MPKRVADEIA ALPEPRGPLR RPCADLSRRV RLLAPLLDHL PASSSSSSST PLADALGAAR 60 61 DLLRKTRDGS KIDQAMRGDA FLDEFAGVNR QIHLALDALP YNTFHMPQEV QEQVALVHSQ 120 121 FQRASTRTDP PDTQLSMDLA WALTDNPSDP ALLTRISHKL QLHTMADMKN ESIALHNMVI 180 181 STAGEPDGCV DQMSSLLKKL KDCVVTEDHA NDALTTRSAS IKHRSPIIPD EFRCPISLEL 240 241 MQDPVIVSSG QTYERSCIQK WLDSGHKTCP KTQQPLSHTS LTPNFVLKSL ISQWCEANGI 300 301 ELPKNKQNSR DKKAAKSSDY DHAGLVSLMN RLRSGNQDEQ RAAAGEIRLL AKRNVNNRIC 360 361 IAEAGAIPLL VNLLSSSDPR TQEHAVTALL NLSIHENNKA SIVDSHAIPK IVEVLKTGSM 420 421 ETRENAAATL FSLSVVDENK VTIGAAGAIP PLINLLCDGS PRGKKDAATA IFNLCIYQGN 480 481 KVRAVKAGIV IHLMNFLVDP TGGMIDEALS LLSILAGNPE GKIVIARSEP IPPLVEVIKT 540 541 GSPRNRENAA AILWLLCSAD TEQTLAAKAA GVEDALKELS ETGTDRAKRK ASSILELMHQ 600 601 ANEDSLKGNG H |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..76] | N/A | Confident ab initio structure predictions are available. | |
2 | View Details | [77..220] | 4.165997 | View MSA. Confident ab initio structure predictions are available. | |
3 | View Details | [221..305] | 6.69897 | NMR solution structure of the U box domain from AtPUB14, an armadillo repeat containing protein from Arabidopsis thaliana | |
4 | View Details | [306..611] | 42.0 | Crystal structure of the exportin Cse1p complexed with its cargo ( Kap60p) and RanGTP |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.97 |
Source: Reynolds et al. (2008)