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Protein Overview: SSC14_ARATH

General Information:
Name(s) found: SSC14_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • Sister chromatid cohesion 1 protein 4 OS=Arabidopsis thaliana GN=SYN4 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1031 amino acids

    Gene Ontology:
    Cellular Component: nuclear chromosome [IEA]
    Biological Process: sister chromatid cohesion [IMP][ISS]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFYSQFILAK KGPLGTIWIA AHLERKLRKN QVADTDIGVS VDSILFPEAP IALRLSSHLL  60
   61 LGVVRIYSRK VNYLFDDCSE ALLKVKQAFR SAAVDLPPEE STAPYHSITL PETFDLDDFE 120
  121 LPDNEIFQGN YVDHHVSTKE QITLQDTMDG VVYSTSQFGL DERFGDGDTS QAALDLDEAV 180
  181 FQDKDVIGSD DEGVPGIDHN AYLDAAAPGI KDSMEGVSEA MPMDFNEEQV EDLAMNNEFI 240
  241 EDAQAPQTPG LVEVPNSSSV REQMACDDHM DVEDLNAEEG IKSSGELNAN EMPKRGEDLS 300
  301 SEYNAPESAV TPVEVDKSQI DENVNTQNEP EEERAEHVHV TSPCCSHITT EMEDPGQVMN 360
  361 EAGANVVPDK PDAVPPLETP GEENRDHFAI ATEVNQETDS SLQGDEQAYS RPDGQLNNAH 420
  421 ETDEQLGNLT GFTDSDFPPP EKVLAVPNRQ GDGNDFMVES TPDKEDPGTC NDDAGNNNIT 480
  481 GKKRTFTEST LTAESLNSVE SVGLIQSKRT ADSVPDDDDL LSSILVGKSS FLKMRPTPVL 540
  541 EPATTKRLRS APRSTATKRK VLMDDPMVLH GDIIRQQLTN TEDIRRVRKK APCTVPEIVM 600
  601 LQRQALEDGL FKEPIFTGMS VELVSLHTEP YDLRGIMIIE NDDRHASVGA VEDNECSVTA 660
  661 VEENKTEESS DPQAHPNDCE EQPGTAHTHP QEEQTINQQE ELKDDNELAE KSDLEVLKEG 720
  721 NGAADEVNLV VIDDVSQIPS EEKLDRVEDL QVEESHENHD GEGGQDVCAD PNEKSCTDVI 780
  781 EIAEGDTDIN PIFNEMDLKV EDELPHEDEK TDASAEVSEL GRDDQTPCDN TVGSTETGCL 840
  841 EAGDLSNMAL ENCNEPLVEA NSDGLNPETE SYNKYEPHNE MSNEEASMQN ALDGEHTSRD 900
  901 GLMGDNDEMD TMENAHDTGF LNVDDDEVDE DHEEDDIQYD DETRLLENSG WSSRTRAVAK 960
  961 YLQTLFDKET ENGKNVLVAD KLLAGKTRKE ASRMFFETLV LKTRDYIQVE QGKPYESIII1020
 1021 KPRPKLTKSI F

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..119] Pfam 66.161151 No description for PF04825.5 was found. No confident structure predictions are available.
    2 View Details [120..338] deduced N/A No confident structure predictions are available.
    3 View Details [339..579] deduced N/A No confident structure predictions are available.
    4 View Details [580..743] deduced N/A No confident structure predictions are available.
    5 View Details [744..896] deduced N/A No confident structure predictions are available.
    6 View Details [897..951] deduced N/A No confident structure predictions are available.
    7 View Details [952..1031] Pfam 26.677781 No description for PF04824.8 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle