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Protein Overview: gi|42568257, gi|...

General Information:
Name(s) found: gi|51971014 [NCBI NR]
gi|42568257 [NCBI NR]
Description(s) found:
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  • gi|51971014|dbj|BAD44199.1| GTPase activator protein of Rab-like small GTPases-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|42568257|ref|NP_199009.2| RabGAP/TBC domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • GTPase activator protein of Rab-like small GTPases-like protein [Arabidopsis thaliana]gi|42568257|ref|NP_199009.2| RabGAP/TBC domain-containing protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 RabGAP/TBC domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | RabGAP/TBC domain-containing protein | chr5:16799267-16802679 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • GTPase activator protein of Rab-like small GTPases-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily protein | chr5:16782039-16785451 FORWARD LENGTH=549 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • GTPase activator protein of Rab-like small GTPases-like protein OS=Arabidopsis thaliana GN=At5g41940 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 549 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: regulation of Rab GTPase activity [IEA]
    Molecular Function: Rab GTPase activator activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMFPRLRLTK VFFSPIIAGK WIVFADGSSG GGVGRNGYYG GLWSSAVIPS NVGLAVAVTV  60
   61 MAVAVAFTVY SRRGSIGSPW SLRRRKRVLQ PKQWNAFFTE EGRLSDGGVK FLKKVRSGGV 120
  121 HPSIRPEVWP FLLGVYDLKS NKEERDSIRQ LKLTEYENLR RQCREIHERY ENVCDSKETA 180
  181 QSSNTEDSQV LESHDIEEVE SSTRTITVDE SEKLNSESIM QDENCEKSDV TTEDAAGNDS 240
  241 DSTNPEETET SPFLANEEVE SHNTVNQEKE ISSPSSKPKS QAADEDFMST WQRIIRLDAV 300
  301 RANDEWVPYS PTQAAVSETK ARGIAIQVGL NDYDHLEPCR IFHAARLVGI LEAYAVYDPE 360
  361 IGYCQGMSDL LSPLIAVMED DVLAFWCFVG FMSKARHNFR LDEVGIRRQL SMVSKIIKFK 420
  421 DIHLYRHLEN LEAEDCFFVY RMVVVLFRRE LTFEQTLCLW EVMWADQAAI RTGIAKATWG 480
  481 RIRLRAPPTE DLLLYAIAAS VLQRRKTIIE KYSGMDEIMK ECNSMAGHLD VWKLLDDAHD 540
  541 LVVNLHDKI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..233] FFAS03 2.57 No description for 2g77A was found.
    2 View Details [234..549] PSI-BLAST 54.69897 No description for 2qfzA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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