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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42568257, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMFPRLRLTK VFFSPIIAGK WIVFADGSSG GGVGRNGYYG GLWSSAVIPS NVGLAVAVTV  60
   61 MAVAVAFTVY SRRGSIGSPW SLRRRKRVLQ PKQWNAFFTE EGRLSDGGVK FLKKVRSGGV 120
  121 HPSIRPEVWP FLLGVYDLKS NKEERDSIRQ LKLTEYENLR RQCREIHERY ENVCDSKETA 180
  181 QSSNTEDSQV LESHDIEEVE SSTRTITVDE SEKLNSESIM QDENCEKSDV TTEDAAGNDS 240
  241 DSTNPEETET SPFLANEEVE SHNTVNQEKE ISSPSSKPKS QAADEDFMST WQRIIRLDAV 300
  301 RANDEWVPYS PTQAAVSETK ARGIAIQVGL NDYDHLEPCR IFHAARLVGI LEAYAVYDPE 360
  361 IGYCQGMSDL LSPLIAVMED DVLAFWCFVG FMSKARHNFR LDEVGIRRQL SMVSKIIKFK 420
  421 DIHLYRHLEN LEAEDCFFVY RMVVVLFRRE LTFEQTLCLW EVMWADQAAI RTGIAKATWG 480
  481 RIRLRAPPTE DLLLYAIAAS VLQRRKTIIE KYSGMDEIMK ECNSMAGHLD VWKLLDDAHD 540
  541 LVVNLHDKI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle