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Protein Overview: gi|51970620, gi|...

General Information:
Name(s) found: gi|79515670 [NCBI NR]
gi|51970620 [NCBI NR]
gi|110741922 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|79515670|ref|NP_197295.2| binding / protein binding [Arabidopsis thaliana] [NCBI NR]
  • gi|51970620|dbj|BAD44002.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|110741922|dbj|BAE98902.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 784 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: RNA metabolic process [IEA]
    Molecular Function: protein binding [IEA]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSSRHEKRK EARLQKNQKK HESWLQRHKS EKEKRVSSSA SAQKSGDVIK SEDFRQISDS  60
   61 VTEHMESSSP SGNKDHGKSF IPKKEEVRVK SKEKKMQKVE RIKDLNRPRK KTNFEEFLEM 120
  121 DTPTVISGDQ DAELERRLAK KLKIKKGKLR GMDDGLNDLF EGLPSVLDSM GSELGDSRKK 180
  181 RKKKRSEEKQ DHEDVDELAN EDLEHEESEF SDEESEEEPV GKRDRKRHKK KKKSVDEELE 240
  241 SDLMNITDDG ESETVNYHDS PSSLEKVDTP LHERKPESSS KYVAPHLRSQ AKSESEELTK 300
  301 MRTRIKGLLN KMAESNVETI TAELATIYRS VARSVSSQIF CEEVLTTYAR GNEQYAVFAS 360
  361 FIAGMACLVG MDFSAKLIAS LAKSFEDEYQ KEDSLSLNGI SLLLSYLCIL GVCSSDLIYD 420
  421 FLMTLGKRLT KVDAFTITTV LDCCGMKIRS DDPLAMKTFI ISIQNKANEL KTSSDGQTQM 480
  481 NNMMMEKMLE TISAIKNNKL RAKEDSVQNT RVKKWLQKLR VEEVLLRGLT WSKLLDPEKK 540
  541 GQWWLSGDLV VDSNTAEDIA ETMDAEVVEA QKMLKLAEAQ RMNTDSRKAI FCVIMSSEDY 600
  601 IDAFEKLLRL DLPGKQDREI MRVLVECCLQ EKAFNKFYTV LASKLCEHDK NHKFTLQYCI 660
  661 WDHFKELESM SLQRSMHLAK FVAEIIVTFN LSLAVLKSVD LANPVELTPK RIMHFRMLFE 720
  721 AIFEHPENLV WNLFTRIALN PEYEALRDGI KFFVKEYVVK NNKAIYGKFR KAKEALNNAE 780
  781 GLLM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..272] deduced N/A No confident structure predictions are available.
    2 View Details [273..784] PSI-BLAST 75.221849 CBP80, 80KDa nuclear cap-binding protein


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.45

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle