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Protein Overview: GDPD3_ARATH

General Information:
Name(s) found: GDPD3_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|79528247|ref|NP_199144.3| glycerophosphodiester phosphodiesterase/ phosphoric diester hydrolase [Arabidopsis thaliana] [NCBI NR]
  • gi|51970064|dbj|BAD43724.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • Glycerophosphodiester phosphodiesterase GDPD3 OS=Arabidopsis thaliana GN=GDPD3 PE=2 SV=1 [Swiss-Prot]
  • unnamed protein product [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Similar to glycerophosphoryl diester phosphodiesterase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | glycerophosphodiester phosphodiesterase | chr5:17394174-17396298 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • glycerophosphodiester phosphodiesterase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | PLC-like phosphodiesterases superfamily protein | chr5:17376946-17379070 REVERSE LENGTH=370 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Glycerophosphodiester phosphodiesterase OS=Arabidopsis thaliana GN=At5g43300 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 370 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: glycerol metabolic process [IEA][ISS]
    lipid metabolic process [IEA]
    Molecular Function: phosphoric diester hydrolase activity [IEA]
    glycerophosphodiester phosphodiesterase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALETMTLSL SSSAMLSSGV VEDDKKQEAI VFPKFVLMGH RGFGMNMLQS PDEKMKFIKE  60
   61 NSLLSFNVAA DFPIDFIEFD VQVTRDGCPV IFHDIFMFTQ EQGVIIEKRV TEMDLHEFLS 120
  121 YGPQRDGTNV KPMWRKTKDG RIFEWKVEKD DPLCTLEDAF LNVKHSLGFN IELKFDDNTV 180
  181 YGEGELRQTL DNILTVVNEH SKNRPIIFSS FHPDAARLIR NMQRCYPVFF LTNGGCEIYK 240
  241 DVRRNSLDEA IKLCKESGLQ GLVSEVKAIL RTPNAITRVK DSKLSLLSYG QLNNVVEVIY 300
  301 LQYLMGVEGV IVDMVKDISE AIANIEVTNE DDCEGEDERK CLIRFGEERK KVEITKDMIT 360
  361 LLNKFVPKLL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..370] PSI-BLAST 51.045757 Crystal structure of periplasmic glycerophosphodiester phosphodiesterase from Escherichia coli


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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