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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GDPD3_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALETMTLSL SSSAMLSSGV VEDDKKQEAI VFPKFVLMGH RGFGMNMLQS PDEKMKFIKE  60
   61 NSLLSFNVAA DFPIDFIEFD VQVTRDGCPV IFHDIFMFTQ EQGVIIEKRV TEMDLHEFLS 120
  121 YGPQRDGTNV KPMWRKTKDG RIFEWKVEKD DPLCTLEDAF LNVKHSLGFN IELKFDDNTV 180
  181 YGEGELRQTL DNILTVVNEH SKNRPIIFSS FHPDAARLIR NMQRCYPVFF LTNGGCEIYK 240
  241 DVRRNSLDEA IKLCKESGLQ GLVSEVKAIL RTPNAITRVK DSKLSLLSYG QLNNVVEVIY 300
  301 LQYLMGVEGV IVDMVKDISE AIANIEVTNE DDCEGEDERK CLIRFGEERK KVEITKDMIT 360
  361 LLNKFVPKLL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle