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Protein Overview: TFB2_ARATH

General Information:
Name(s) found: TFB2_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • RNA polymerase II transcription factor B subunit 2 OS=Arabidopsis thaliana GN=TFB2 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 452 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    endomembrane system [IEA]
    Biological Process: DNA repair [IEA]
    regulation of transcription, DNA-dependent [IEA]
    Molecular Function: RNA polymerase II transcription factor activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQVKIIAKN FMDMVASLPA IKLDKLYNNV FICEAILRSL PPLAKKYVLQ MLYIDVPVPA  60
   61 TMMEEWVLAD GTSKHRVAID RLIQLRIFSE ISDRKRGTSY SLNPTFQNNL QKHIISGGVL 120
  121 PREPMNSDNA IKLPSLQELE TYALKQWECF LLQLINSGQG EKLTGISSSM MKIFQRGLLS 180
  181 QRDKDGPRLT ESGFQFLLMD TNAQLWYIIR EYILNAEERD VDPADLISFL LELSFHVTGQ 240
  241 AYNLNTLTEV QNNTLKDLAD LGLVKLQQGR KDSWFIPTKL ATNLSVSLAD SSARKEGFVV 300
  301 METNFRMYAY STSKLQCEIL RLFARIEYQL PNLIACAITK ESLYNAFDNG ITSDQIITFL 360
  361 QQNSHPRCAD RVPSIPENVT DQIRLWETDL QRIEMTQAHF YDEFPSKDVF EAACDFAREW 420
  421 RGLLWEDSKR MRLVVKSEVH NQMREFLHTQ SR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..162] MSA 3.030972 View MSA. No confident structure predictions are available.
    2 View Details [163..288] deduced N/A No confident structure predictions are available.
    3 View Details [289..452] MSA 20.061996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle