YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|42568781, gi|...

General Information:
Name(s) found: gi|94442467 [NCBI NR]
gi|51968502 [NCBI NR]
gi|42568781 [NCBI NR]
Description(s) found:
Found 11 descriptions.
SHOW ALL
  • gi|94442467|gb|ABF19021.1| At5g65080 [Arabidopsis thaliana] [NCBI NR]
  • gi|51968502|dbj|BAD42943.1| MADS box protein FCL1 [Arabidopsis thaliana] [NCBI NR]
  • gi|42568781|ref|NP_201313.2| MAF5 (MADS AFFECTING FLOWERING 5); transcription factor [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 205 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: negative regulation of flower development [IMP]
    vernalization response [IEP]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCRKSEAMGR RRVEIKRIEN KSSRQVTFCK RRNGLMEKAR QLSILCGSSV ALFIVSSTGK  60
   61 LYNSSSGDSM AKIISRFKIQ QADDPETLDL EDKTQDYLSH KELLEIVQRK IEEAKGDNVS 120
  121 IESLISMEEQ LKSALSVIRA RKTELLMELV KNLQDKEKLL KEKNKVLASE VGKLKKILET 180
  181 GDERAVMSPE NSSGHSPPET LPLLK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..80] PSI-BLAST 19.69897 Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2
    2 View Details [81..205] Pfam 3.522879 No description for PF01486.8 was found. Confident ab initio structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.0368771990474 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle