YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42568781, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.54
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCRKSEAMGR RRVEIKRIEN KSSRQVTFCK RRNGLMEKAR QLSILCGSSV ALFIVSSTGK  60
   61 LYNSSSGDSM AKIISRFKIQ QADDPETLDL EDKTQDYLSH KELLEIVQRK IEEAKGDNVS 120
  121 IESLISMEEQ LKSALSVIRA RKTELLMELV KNLQDKEKLL KEKNKVLASE VGKLKKILET 180
  181 GDERAVMSPE NSSGHSPPET LPLLK

Type	Start	End	Confidence
Cytoplasmic	1	40	0.52
Transmembrane Helix	41	59	0.51
Non-Cytoplasmic	60	205	0.98