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Protein Overview: gi|50253123, gi|...

General Information:
Name(s) found: gi|50253123 [NCBI NR]
gi|50252992 [NCBI NR]
gi|255671167 [NCBI NR]
gi|222623440 [NCBI NR]
gi|215701258 [NCBI NR]
Description(s) found:
Found 7 descriptions.
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  • gi|50253123|dbj|BAD29369.1| dTDP-D-glucose 4,6-dehydratase-like [Oryza sativa Japonica Group] [NCBI NR]
  • gi|50252992|dbj|BAD29243.1| dTDP-D-glucose 4,6-dehydratase-like [Oryza sativa Japonica Group] [NCBI NR]
  • gi|255671167|dbj|BAH91843.1| Os02g0678400 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|222623440|gb|EEE57572.1| hypothetical protein OsJ_07924 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215701258|dbj|BAG92682.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 311 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVATNGSSS STSESAETAQ SQAYKFLIYG RTGWIGGLLG QLCAARGIPF AYGAGRLENR  60
   61 AQLETDIDEV APTHVFNAAG VTGRPNVDWC ETHRTETIRA NVCGTLTLAD VCRARGLVLI 120
  121 NYATGCIFEY DAGHQLGTGI GFKEEDTPNF VGSFYSKTKA MVEELLKNYE NVCTLRVRMP 180
  181 ISSDLSNPRN FITKIARYDK VVDIPNSMTI LDELLPISIE MAKRNLTGIW NFTNPGVVSH 240
  241 NEILEMYRDY IDPNFSWKNF TLEEQAKVIV APRSNNELDC TKLKAEFPEL LSIKDSLVRY 300
  301 VFKPNQKTSK A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..311] PSI-BLAST 69.0 dTDP-glucose 4,6-dehydratase (RmlB)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.26736023026862 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.68812524232244 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.74

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle