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Protein Overview: gi|115479143, gi...

General Information:
Name(s) found: gi|50251471 [NCBI NR]
gi|125605683 [NCBI NR]
gi|115479143 [NCBI NR]
gi|113631398 [NCBI NR]
Description(s) found:
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  • gi|50251471|dbj|BAD28536.1| unknown protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|125605683|gb|EAZ44719.1| hypothetical protein OsJ_29350 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115479143|ref|NP_001063165.1| Os09g0413600 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113631398|dbj|BAF25079.1| Os09g0413600 [Oryza sativa Japonica Group] [NCBI NR]
  • unknown protein [Oryza sativa (japonica cultivar-group)] [nrdb_11152004_Chlamydomonas]
  • Os09g0413600 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 1136 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAGEGGGAP AAAAAVSNGF VHAVVRWCFS PLFFWLFTVA LVAAIHLAST YISPSRDEED  60
   61 KEKKARRGGD FAGAGEEREE EEVGRNDDKI LEMMRSFSFM HASEEDFMEG MATYDHVVAR 120
  121 MAPEPLPLTP PAAPPPSTFS FRFQHQLPEI LRETAVVSGE IPVQVLEEHE PEKKPAIAME 180
  181 SKQERERDAE EREVVMEEEE EEEQSREVVE AAAAAPMIVS TTHNYRFLTE RDFRGFVKEP 240
  241 EAITVRVQES FVPSPELEAV AVAAAAQPEE RRVVDGAPRR GFLTTNDFRP ANEPDSARQS 300
  301 VASQLGRKPA ASSPSAASRG SAAAAVSGRT SFASEFSGFG GDSDSESTAS DGYSVKDLVV 360
  361 DSDSDWFLSE KDFPAAAVAG HDAGSLRGYY KAKVLKALEA LDASASNLER SFQDSATTVS 420
  421 PGSVVGQASP DIIGAADDPA KYPEDMWSRS PSPDVEYNED EHKGNEATNM AEEVSFDMSD 480
  481 DERPPASGGK KTTAMAASSS SSSPVHDAES EDENSLDHSE KETITIHDHS YESVSDVKRR 540
  541 SPEAISDAEL DDASSRHAAV LDAKVRSPDV HSSEPIFDNY EEHEVSNDQS QAAVSDEKRS 600
  601 TPHSEREFAG TDDRSHELIS DVWKDIVGAN DQSLASAHDE ERSPDQSVAI ISDDHKAIVS 660
  661 ATNDSSNGEV SDHKSTPETA EQEFSGNDDP YELVADARII SERAEEDDIP NERPGNATRH 720
  721 VTFSVAEKGK VLDVVEEDQE DKWKDLTEEE EDELESLWEH QDLIEQLKLE LKKVRSIGLP 780
  781 TILEESETPK APMEDLKPWR IDAKFLREDP MDELNKFFKS YRERMRKFDI LCYQKMYAID 840
  841 FLQFRGPQQS ANSLKSLSPT VTSILSHNFR SSRRKSPEDP SERFLKELRY DLETVYVGQM 900
  901 CLSWEFLRWQ YEQAHDLPES DPYHSHQYNQ VAGEFQQFQV VVQRFVEDES FKGPRLPNYI 960
  961 NNRCVLRNLL QVPVIKEDSL KDRMEDQRKG NYVITSEELE EIMEECMRVF WEFIRSDRVE1020
 1021 TTSVLKGLSS THVELQDPLD HDLMMHIDST LQKKEKRLKD LLRTGNCIVK KFKKPKEDTL1080
 1081 NQSLFFSQVD MRLVARVLRM PRITSEQLQW CKAKLDKIAL VDRRIHREAS FLLFPC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..468] PSI-BLAST 13.39794 Heavy meromyosin subfragment
    2 View Details [469..629] deduced N/A No confident structure predictions are available.
    3 View Details [630..774] deduced N/A No confident structure predictions are available.
    4 View Details [775..886] deduced N/A No confident structure predictions are available.
    5 View Details [887..1136] PSI-BLAST 4.39794 Tropomyosin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle