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Protein Overview: AGD14_ARATH

General Information:
Name(s) found: AGD14_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|30680768|ref|NP_850941.1| ZIGA4 (ARF GAP-like zinc finger-containing protein ZiGA4); ARF GTPase activator/ DNA binding / zinc ion binding [Arabidopsis thaliana] [NCBI NR]
  • gi|209572800|sp|Q8RXE7.2|AGD14_ARATH RecName: Full=Probable ADP-ribosylation factor GTPase-activating protein AGD14; AltName: Full=Protein ARF-GAP DOMAIN 14; Short=AtAGD14; AltName: Full=Protein ZIGA4 [NCBI NR]
  • gi|10441354|gb|AAG17005.1|AF184145_1 ARF GAP-like zinc finger-containing protein ZiGA4 [Arabidopsis thaliana] [NCBI NR]
  • Probable ADP-ribosylation factor GTPase-activating protein AGD14 OS=Arabidopsis thaliana GN=AGD14 PE=1 SV=2 [Swiss-Prot]
  • ARF GAP-like zinc finger-containing protein ZiGA4 [Arabidopsis thaliana]gi|30680768|ref|NP_850941.1| ARF GAP-like zinc finger-containing protein ZiGA4 (ZIGA4) [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 ARF GAP-like zinc finger-containing protein ZiGA4 (ZIGA4) [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: AGD14, ZIGA4 | ZIGA4 (ARF GAP-LIKE ZINC FINGER-CONTAINING PROTEIN ZIGA4); DNA binding | chr1:2762823-2768390 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ARF GAP-like zinc finger-containing protein ZiGA4 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ZIGA4; DNA binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ZIGA4, AGD14 | ARF GAP-like zinc finger-containing protein ZIGA4 | chr1:2762820-2768387 FORWARD LENGTH=649 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 649 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    plasma membrane [IDA]
    Biological Process: regulation of ARF GTPase activity [IEA]
    Molecular Function: DNA binding [ISS]
    zinc ion binding [IEA]
    ARF GTPase activator activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMGSKREEER NEKIIRGLMK LPPNRRCINC NSLGPQYVCT TFWTFVCMAC SGIHREFTHR  60
   61 VKSVSMSKFT SKEVEVLQNG GNQRAREIYL KNWDHQRQRL PENSNAERVR EFIKNVYVQK 120
  121 KYAGANDADK PSKDSQDHVS SEDMTRRANS YHSYSQSPPY DYQYEERRYG KIPLGFTGKS 180
  181 ASVKGLHAKA SSFVYSPGRF SDHMFEDQFS NEDSAPRASD YSVSSAGDPF RSDIQSPNFQ 240
  241 QEAEFRSPQF QHSNAPPSEN LFPGRQHQRT TSSGSVRSVD SNFMSIKSYT SGGLGEAVSE 300
  301 SRQNTGSQQG KTSNHVPLVA ESTKAPIDLF QLPGAPVAQS VDTFQPSIAP RSPPVNLQQA 360
  361 PQTYSFTPAN SFAGNLGQQP TSRPSELSAP KNEGWASFDN PMPAAKSTNV ITSPGDFQLE 420
  421 LKIEEILQPS TSMQLPPYPS TVDQHALSIP SPWQEDLSNV LKDVVDNPQP WNAFPDSIEA 480
  481 NPLDSSRNIH QQVDGASTSS YNTDHQHLES QVLEELSNDG TQTTRIPAGS SAFGFPGNIG 540
  541 MAPSYSEEAW QHVNEQKSAN PFDLPYDSEF DSNDMFLDMS SLQGALPDIQ TPQAFLNGVS 600
  601 QPWLAADSVP SYLPAPAVAQ GGLAYMAGQA STNSAAQGPV AFTGGNPFA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..261] PSI-BLAST 46.30103 Pyk2-associated protein beta; Pyk2-associated protein beta ARF-GAP domain
    2 View Details [262..431] deduced N/A No confident structure predictions are available.
    3 View Details [432..649] MSA 2.268995 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle