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Protein Overview: gi|18420568, gi|...

General Information:
Name(s) found: gi|18420568 [NCBI NR]
gi|17380628 [NCBI NR]
gi|15450581 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|18420568|ref|NP_568076.1| DNAJ heat shock family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|17380628|gb|AAL36077.1| AT4g39960/T5J17_130 [Arabidopsis thaliana] [NCBI NR]
  • gi|15450581|gb|AAK96562.1| AT4g39960/T5J17_130 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 447 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    chloroplast thylakoid membrane [IDA]
    Biological Process: response to heat [IEA]
    protein folding [IEA][ISS]
    Molecular Function: ATP binding [IEA]
    heat shock protein binding [IEA]
    unfolded protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALIQFGSSC VAQWGILRPR FAVKAFYPSR LESHQDNCIS QINCLGASRS SMFAQGSLPF  60
   61 LSLTGVSPNT HSRRGARFTV RADTDFYSVL GVSKNATKAE IKSAYRKLAR SYHPDVNKDA 120
  121 GAEDKFKEIS NAYEILSDDE KRSLYDRYGE AGVKGAGMGG MGDYSNPFDL FESLFEGMGG 180
  181 MGGMGGGMGS RGSRSRAIDG EDEYYSLILN FKEAVFGIEK EIEISRLESC GTCNGSGAKA 240
  241 GTKPTKCKTC GGQGQVVAST RTPLGVFQQV MTCSPCNGTG EISKPCGACS GDGRVRRTKR 300
  301 ISLKVPAGVD SGSRLRVRGE GNAGKRGGSP GDLFAVIEVI PDPVLKRDDT NILYTCKISY 360
  361 VDAILGTTLK VPTVDGEVDL KVPAGTQPST TLVMAKKGVP VLNKSKMRGD QLVRVQVEIP 420
  421 KRLSKEEKML VEELADMSKN KVANSRR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..80] deduced N/A No confident structure predictions are available.
    2 View Details [81..185] PSI-BLAST 22.09691 J-DOMAIN (RESIDUES 1-77) OF THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 1-104) OF THE MOLECULAR CHAPERONE DNAJ, NMR, 20 STRUCTURES
    3 View Details [186..447] PSI-BLAST 47.522879 The crystal structure of Hsp40 Ydj1


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.80

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle