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Protein Overview: gi|55670329, gi|...

General Information:
Name(s) found: gi|55670329 [NCBI NR]
gi|55670327 [NCBI NR]
gi|55670325 [NCBI NR]
gi|55670323 [NCBI NR]
gi|55670321 [NCBI NR]
gi|55670319 [NCBI NR]
Description(s) found:
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  • gi|55670329|pdb|1ULJ|F Chain F, Biphenyl Dioxygenase (Bpha1a2) In Complex With The Substrate [NCBI NR]
  • gi|55670327|pdb|1ULJ|D Chain D, Biphenyl Dioxygenase (Bpha1a2) In Complex With The Substrate [NCBI NR]
  • gi|55670325|pdb|1ULJ|B Chain B, Biphenyl Dioxygenase (Bpha1a2) In Complex With The Substrate [NCBI NR]
  • gi|55670323|pdb|1ULI|F Chain F, Biphenyl Dioxygenase (Bpha1a2) Derived From Rhodococcus Sp. Strain Rha1 [NCBI NR]
  • gi|55670321|pdb|1ULI|D Chain D, Biphenyl Dioxygenase (Bpha1a2) Derived From Rhodococcus Sp. Strain Rha1 [NCBI NR]
  • gi|55670319|pdb|1ULI|B Chain B, Biphenyl Dioxygenase (Bpha1a2) Derived From Rhodococcus Sp. Strain Rha1 [NCBI NR]
  • biphenyl dioxygenase [Rhodococcus sp. RHA1]gi|55670329|pdb|1ULJ|F Chain F, Biphenyl Dioxygenase (Bpha1a2) In Complex With The Substrategi|55670327|pdb|1ULJ|D Chain D, Biphenyl Dioxygenase (Bpha1a2) In Complex With The Substrategi|55670325|pdb|1ULJ|B Ch [nrdb_11152004_Chlamydomonas]
  • Chain B, Biphenyl Dioxygenase (Bpha1a2) In Complex With The Substrate [nr-271106-contam.fasta]
  • Chain F, Biphenyl Dioxygenase (Bpha1a2) In Complex With The Substrate [nr-271106-contam.fasta]
  • Chain D, Biphenyl Dioxygenase (Bpha1a2) Derived From Rhodococcus Sp. Strain Rha1 [nr-271106-contam.fasta]
  • Chain B, Biphenyl Dioxygenase (Bpha1a2) Derived From Rhodococcus Sp. Strain Rha1 [nr-271106-contam.fasta]
  • Chain F, Biphenyl Dioxygenase (Bpha1a2) Derived From Rhodococcus Sp. Strain Rha1 [nr-271106-contam.fasta]
  • Chain D, Biphenyl Dioxygenase (Bpha1a2) In Complex With The Substrate [nr-271106-contam.fasta]
    • Organism: Rhodococcus sp.
    Length: 187 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIDAESPTTA FRTKPAPVDP SLQHEIEQFY YWEAKLLNDR RFQEWFDLLA EDIHYFMPIR  60
   61 TTRIMRETAQ EYSGAREYAH FDDNAQMMRG RLRKITSDVS WSENPASRTR HVISNVMIVD 120
  121 GEKPGEYHVS SVFIVYRNRL ERQLDIFAGE RKDILRRTGS EAGFELAKRT ILIDQSTILS 180
  181 NNLSFFF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..187] PSI-BLAST 58.522879 Biphenyl dioxygenase (BphA1A2) derived from Rhodococcus sp. strain RHA1


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle