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Protein Overview: gi|55670328, gi|...

General Information:
Name(s) found: gi|55670328 [NCBI NR]
gi|55670326 [NCBI NR]
gi|55670324 [NCBI NR]
gi|55670322 [NCBI NR]
gi|55670320 [NCBI NR]
gi|55670318 [NCBI NR]
Description(s) found:
Found 13 descriptions.
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  • gi|55670328|pdb|1ULJ|E Chain E, Biphenyl Dioxygenase (Bpha1a2) In Complex With The Substrate [NCBI NR]
  • gi|55670326|pdb|1ULJ|C Chain C, Biphenyl Dioxygenase (Bpha1a2) In Complex With The Substrate [NCBI NR]
  • gi|55670324|pdb|1ULJ|A Chain A, Biphenyl Dioxygenase (Bpha1a2) In Complex With The Substrate [NCBI NR]
  • gi|55670322|pdb|1ULI|E Chain E, Biphenyl Dioxygenase (Bpha1a2) Derived From Rhodococcus Sp. Strain Rha1 [NCBI NR]
  • gi|55670320|pdb|1ULI|C Chain C, Biphenyl Dioxygenase (Bpha1a2) Derived From Rhodococcus Sp. Strain Rha1 [NCBI NR]
  • gi|55670318|pdb|1ULI|A Chain A, Biphenyl Dioxygenase (Bpha1a2) Derived From Rhodococcus Sp. Strain Rha1 [NCBI NR]
    • Organism: Rhodococcus sp.
    Length: 460 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDVQCEPAL AGRKPKWADA DIAELVDERT GRLDPRIYTD EALYEQELER IFGRSWLLMG  60
   61 HETQIPKAGD FMTNYMGEDP VMVVRQKNGE IRVFLNQCRH RGMRICRADG GNAKSFTCSY 120
  121 HGWAYDTGGN LVSVPFEEQA FPGLRKEDWG PLQARVETYK GLIFANWDAD APDLDTYLGE 180
  181 AKFYMDHMLD RTEAGTEAIP GIQKWVIPCN WKFAAEQFCS DMYHAGTTSH LSGILAGLPD 240
  241 GVDLSELAPP TEGIQYRATW GGHGSGFYIG DPNLLLAIMG PKVTEYWTQG PAAEKASERL 300
  301 GSTERGQQLM AQHMTIFPTC SFLPGINTIR AWHPRGPNEI EVWAFTVVDA DAPEEMKEEY 360
  361 RQQTLRTFSA GGVFEQDDGE NWVEIQQVLR GHKARSRPFN AEMGLGQTDS DNPDYPGTIS 420
  421 YVYSEEAARG LYTQWVRMMT SPDWAALDAT RPAVSESTHT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..460] PSI-BLAST 112.0 Biphenyl dioxygenase (BphA1A2) derived from Rhodococcus sp. strain RHA1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.11718133018478 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.194421372741844 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle