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Protein Overview: gi|16323258, gi|...

General Information:
Name(s) found: gi|18396004 [NCBI NR]
gi|16323258 [NCBI NR]
gi|13926327 [NCBI NR]
Description(s) found:
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  • gi|18396004|ref|NP_564254.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|16323258|gb|AAL15363.1| At1g26660/T24P13_4 [Arabidopsis thaliana] [NCBI NR]
  • gi|13926327|gb|AAK49628.1|AF372912_1 At1g26660/T24P13_4 [Arabidopsis thaliana] [NCBI NR]
  • At1g26660/T24P13_4 [Arabidopsis thaliana]gi|13926327|gb|AAK49628.1| At1g26660/T24P13_4 [Arabidopsis thaliana]gi|18396004|ref|NP_564254.1| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | similar to RNA polymerase II mediator complex protein-related [Arabidopsis thaliana] (TAIR:AT5G41910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62915.1); contains domain PTHR13345:SF2 (PTHR13345:SF2); contains domain PD33 [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At1g26660/T24P13_4 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | similar to RNA polymerase II mediator complex protein-related [Arabidopsis thaliana] (TAIR:AT5G41910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62915.1); contains domain PTHR13345:SF2 (PTHR13345:SF2); contains domain PD331788 (PD331788); contains domain PTHR13345 (PTHR13345) | chr1:9214497-9215413 FORWARD [TAIR_A_Thaliana_na_04-12-2008_reversed.fasta]
  • | Symbols: | Mediator complex, subunit Med10 | chr1:9214510-9215426 FORWARD LENGTH=189 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Isoform 2 of Mediator of RNA polymerase II transcription subunit 10b OS=Arabidopsis thaliana GN=MED10B [ARATH-contam.fasta]
  • Isoform of F4HPA7, Isoform 2 of Mediator of RNA polymerase II transcription subunit 10b OS=Arabidopsis thaliana GN=MED10B [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 189 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPTQNTSAG IGGSNGTIRY QTNDGTSTVT VADDSKENLS QVINSIEKTL GVLHQLHLTV  60
   61 TSFTPASQLH LLQRLNSLVM ELDNMTKLSE KCNIQIPMEV LNLIDDGKNP DEFTKDVLNS 120
  121 CIARNQVTKG KTDAFKDLRK HILEELEQNF PDEVDMYREI RASSAAEAKR LAQSQSVLPN 180
  181 GDAKVKNEL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..189] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle