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View Structure Prediction Details

Protein: gi|16323258, gi|...
Organism: Arabidopsis thaliana
Length: 189 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|16323258, gi|....

Description E-value Query
Range
Subject
Range
MD10B_ARATH - Mediator of RNA polymerase II transcription subunit 10b OS=Arabidopsis thaliana GN=MED10B PE=1 SV=1
286.0 [0..1] [189..1]

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Predicted Domain #1
Region A:
Residues: [1-189]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPTQNTSAG IGGSNGTIRY QTNDGTSTVT VADDSKENLS QVINSIEKTL GVLHQLHLTV  60
   61 TSFTPASQLH LLQRLNSLVM ELDNMTKLSE KCNIQIPMEV LNLIDDGKNP DEFTKDVLNS 120
  121 CIARNQVTKG KTDAFKDLRK HILEELEQNF PDEVDMYREI RASSAAEAKR LAQSQSVLPN 180
  181 GDAKVKNEL

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
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Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle