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Protein Overview: NYC1_ARATH

General Information:
Name(s) found: NYC1_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Probable chlorophyll(ide) b reductase NYC1, chloroplastic OS=Arabidopsis thaliana GN=NYC1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 496 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IC]
    Biological Process: PSII associated light-harvesting complex II catabolic process [IMP]
    chlorophyll catabolic process [IMP]
    Molecular Function: oxidoreductase activity [ISS]
    chlorophyll(ide) b reductase activity [IMP]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTLTKIQVY PQVLEHRLFF RDPIRVGSRL TCRERSNRVY VHRCEKKVER KRKVEKFKGN  60
   61 GSWDSLKSGF LGFSKLGFLS KDEYNQKVEN LEMVFSSVAV QIARYIVTMT STGAILLIGF 120
  121 QLSGGDSSMN SLVWYSWLGG IIIGTMTGAN MVLEDHYRAG PRNVVITGST RGLGKALARE 180
  181 FLLSGDRVIV TSRSSESVDM TVKELEQNLK EIMSNASESA RKKLSDAKVV GIACDVCKPE 240
  241 DVEKLSNFAV KELGSINIWI NNAGTNKGFR PLLEFTEEDI TQIVSTNLIG SILCTRGAMD 300
  301 VMSRQHSGGH IFNMDGAGSG GSSTPLTAVY GSTKCGLRQF HGSIVKESQK TNVGLHTASP 360
  361 GMVLTELLLS GSSIKNKQMF NIICELPETV ARTLVPRMRV VKGSGKAVNY LTPPRILLAI 420
  421 VTSWLRRGRW FDDQGRALYA AEADRLRNWA ENRTRLSLTD AMEMYTENTW VSVFSLSVVC 480
  481 AFIILQSTTP SSFPGT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..398] PSI-BLAST 18.0 No description for 2fr0A was found.
    2 View Details [399..496] PSI-BLAST 60.30103 Crystal structure of peroxisomal trans 2-enoyl CoA reductase


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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