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Protein Overview: gi|49258638

General Information:
Name(s) found: gi|49258638 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|49258638|pdb|1R4P|A Chain A, Shiga Toxin Type 2 [NCBI NR]
    • Organism: Escherichia coli
    Length: 297 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 REFTIDFSTQ QSYVSSLNSI RTEISTPLEH ISQGTTSVSV INHTPPGSYF AVDIRGLDVY  60
   61 QARFDHLRLI IEQNNLYVAG FVNTATNTFY RFSDFTHISV PGVTTVSMTT DSSYTTLQRV 120
  121 AALERSGMQI SRHSLVSSYL ALMEFSGNTM TRDASRAVLR FVTVTAEALR FRQIQREFRQ 180
  181 ALSETAPVYT MTPGDVDLTL NWGRISNVLP EYRGEDGVRV GRISFNNISA ILGTVAVILN 240
  241 CHHQGARSVR AVNEESQPEC QITGDRPVIK INNTLWESNT AAAFLNRKSQ FLYTTGK

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|189095939, gi... gi|49258638

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..297] PSI-BLAST 88.69897 Shiga toxin type 2

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.372436499192166 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle