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Protein Overview: gi|162318786, gi...

General Information:
Name(s) found: gi|225000204 [NCBI NR]
gi|162318786 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|225000204|gb|AAI72462.1| Dimethylglycine dehydrogenase [synthetic construct] [NCBI NR]
  • gi|162318786|gb|AAI56313.1| Dimethylglycine dehydrogenase [synthetic construct] [NCBI NR]
    • Organism: synthetic construct
    Length: 866 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRPGAQLLR GLLLRSCPLQ GSPGRPRSVC GREGEEKPPL SAETQWKDRA ETVIIGGGCV  60
   61 GVSLAYHLAK AGMKDVVLLE KSELTAGSTW HAAGLTTYFH PGINLKKIHY DSIKLYEKLE 120
  121 EETGQVVGFH QPGSIRLATT PVRVDEFKYQ MTRTGWHATE QYLIEPEKIQ EMFPLLNMNK 180
  181 VLAGLYNPGD GHIDPYSLTM ALAAGARKCG ALLKYPAPVT SLKARSDGTW DVETPQGSMR 240
  241 ANRIVNAAGF WAREVGKMIG LEHPLIPVQH QYVVTSTISE VKALKRELPV LRDLEGSYYL 300
  301 RQERDGLLFG PYESQEKMKV QDSWVTNGVP PGFGKELFES DLDRIMEHIK AAMEMVPVLK 360
  361 KADIINVVNG PITYSPDILP MVGPHQGVRN YWVAIGFGYG IIHAGGVGKY LSDWILHGEP 420
  421 PFDLIELDPN RYGKWTTTQY TEAKARESYG FNNIVGYPKE ERFAGRPTQR VSGLYQRLES 480
  481 KCSMGFHAGW EQPHWFYKPG QDTQYRPSFR RTNWFEPVGS EYKQVMQRVA VTDLSPFGKF 540
  541 NIKGQDSIRL LDHLFANVIP KVGFTNISHM LTPKGRVYAE LTVSHQSPGE FLLITGSGSE 600
  601 LHDLRWIEEE AVKGGYDVEI KNITDELGVL GVAGPQARKV LQKLTSEDLS DDVFKFLQTK 660
  661 SLKVSNIPVT AIRISYTGEL GWELYHRRED SVALYDAIMN AGQEEGIDNF GTYAMNALRL 720
  721 EKAFRAWGLE MNCDTNPLEA GLEYFVKLNK PADFIGKQAL KQIKAKGLKR RLVCLTLATD 780
  781 DVDPEGNESI WYNGKVVGNT TSGSYSYSIQ KSLAFAYVPV QLSEVGQQVE VELLGKNYPA 840
  841 VIIQEPLVLT EPTRNRLQKK GGKDKT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..866] PSI-BLAST 142.0 Crystal structure of dimethylglycine oxidase of Arthrobacter globiformis in complex with acetate

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • aminomethyltransferase activity
    		•  10.5654741349554 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
    		•  5.37200252580633 bayes_pls_golite062009
  • glycine dehydrogenase (decarboxylating) activity
    		•  5.37200252580633 bayes_pls_golite062009
  • choline dehydrogenase activity
    		•  3.17551571315937 bayes_pls_golite062009
  • sarcosine dehydrogenase activity
    		•  3.16989177210403 bayes_pls_golite062009
  • dimethylglycine dehydrogenase activity
    		•  2.89047185292175 bayes_pls_golite062009
  • methyltransferase activity
    		•  2.70138650934058 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  2.61988251128991 bayes_pls_golite062009
  • catalytic activity
    		•  1.65079399897053 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor
    		•  1.61125987248836 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors
    		•  1.48681373014973 bayes_pls_golite062009
  • dihydrolipoyl dehydrogenase activity
    		•  1.24564487540873 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors
    		•  1.19783690850993 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.867567984371732 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH group of donors
    		•  0.550291785460228 bayes_pls_golite062009
  • transferase activity
    		•  0.217873555384951 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  0.170082356807927 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle