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Protein Overview: gi|49258601, gi|...

General Information:
Name(s) found: gi|49258602 [NCBI NR]
gi|49258601 [NCBI NR]
Description(s) found:
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  • gi|49258602|pdb|1QYA|B Chain B, Crystal Structure Of E. Coli Protein Ydde [NCBI NR]
  • gi|49258601|pdb|1QYA|A Chain A, Crystal Structure Of E. Coli Protein Ydde [NCBI NR]
  • Chain B, Crystal Structure Of E. Coli Protein Yddegi|49258601|pdb|1QYA|A Chain A, Crystal Structure Of E. Coli Protein Ydde [nrdb_11152004_Chlamydomonas]
  • Chain B, Crystal Structure Of E. Coli Protein Ydde [nr-271106-contam.fasta]
  • Chain A, Crystal Structure Of E. Coli Protein Ydde [nr-271106-contam.fasta]
    • Organism: Escherichia coli
    Length: 307 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ESTSLYKKAG LKPQVYHVDA FTSQPFRGNS AGVVFPADNL SEAQMQLIAR ELGHSETAFL  60
   61 LHSDDSDVRI RYFTPTVEVP ICGHATVAAH YVRAKVLGLG NCTIWQTSLA GKHRVTIEKH 120
  121 NDDYRISLEQ GTPGFEPPLE GETRAAIINA LHLTEDDILP GLPIQVATTG HSKVMIPLKP 180
  181 EVDIDALSPD LNALTAISKK IGCNGFFPFQ IRPGKNETDG RMFSPAIGIV EDPVTGNANG 240
  241 PMGAWLVHHN VLPHDGNVLR VKGHQGRALG RDGMIEVTVT IRDNQPEKVT ISGTAVILFH 300
  301 AEWAIEL

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. gi|189095939, gi... gi|49258601, gi|...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..307] PSI-BLAST 65.0 CRYSTAL STRUCTURE OF E. COLI PROTEIN YDDE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.00848565859536 bayes_pls_golite062009
  • amino-acid racemase activity
    		•  0.0628393252100677 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle