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Protein Overview: gi|218202668

General Information:
Name(s) found: gi|218202668 [NCBI NR]
Description(s) found:
  • gi|218202668|gb|EEC85095.1| hypothetical protein OsI_32467 [Oryza sativa Indica Group] [NCBI NR]
    • Organism: Oryza sativa Indica Group
    Length: 591 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMGAVLSSR TFASPLSSSG KQHPPQNNKC TCSSPPTRDK FSRLTTRTTI FQVSNYSRST  60
   61 SMERFQLSAR FHQPVVDSST NYLTRWFYNA NLKRRRIECF LTSDPINTGW LKPRRWDNFT 120
  121 SLDTACVQPD YKIPVRTRAD CKAEQYEITG SPLSPSDVPA EAVLIGDTNE ISPWWQQFPK 180
  181 RWTVVLLCFF SFLLCNMDRV NMSIAILPMS SEFGWSPATV GLIQSSFFWG YLLTQILGGI 240
  241 WADRFGGKVV LGFGVVWWSI ATVLTPLAAK IGLPFLLVMR AFMGIGEGVA MPAMNNILSK 300
  301 WVPVSERSRS LALVYSGMYL GSVTGLAFSP LLISRFGWPS VFYAFGSLGS VWFALWQRKA 360
  361 HSSPSEDPEL SKAEKRYILG GSTLKEPVTS IPWKLILSKP PVWALIVSHF CHNWGTFILL 420
  421 TWMPTYYNQV LKFNLTESGL LCVLPWLTMA IFANIGGWIA DTLVGRGVSI TNVRKIMQSI 480
  481 GFLGPALFLT LLSKVRTPAM AVLCMACSQG SDAFSQSGLY SNHQDIGPRY AGVLLGLSNT 540
  541 AGVLAGVFGT AATGYILQKG SWDSVFQVAV VLYIVGTVVW NVFSTGEKVL E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..160] deduced N/A No confident structure predictions are available.
    2 View Details [161..591] PSI-BLAST 55.69897 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • substrate-specific transmembrane transporter activity
    		•  5.46247398538901 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  4.58978526526921 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  4.31967711223954 bayes_pls_golite062009
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  3.94605227012838 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  2.99050613058546 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  2.99050613058546 bayes_pls_golite062009
  • carbohydrate transmembrane transporter activity
    		•  2.62141276633776 bayes_pls_golite062009
  • sugar transmembrane transporter activity
    		•  2.47557586092261 bayes_pls_golite062009
  • inorganic anion transmembrane transporter activity
    		•  2.33121027955345 bayes_pls_golite062009
  • glucose-6-phosphate transmembrane transporter activity
    		•  2.32839532867295 bayes_pls_golite062009
  • hexose phosphate transmembrane transporter activity
    		•  2.32839532867295 bayes_pls_golite062009
  • solute:hydrogen symporter activity
    		•  2.10485633822652 bayes_pls_golite062009
  • phosphate transmembrane transporter activity
    		•  1.78662033436109 bayes_pls_golite062009
  • monosaccharide transmembrane transporter activity
    		•  1.6904339767429 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • binding
    		•  0.805286077372817 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle