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Protein Overview: gi|218199149

General Information:
Name(s) found: gi|218199149 [NCBI NR]
Description(s) found:
  • gi|218199149|gb|EEC81576.1| hypothetical protein OsI_25027 [Oryza sativa Indica Group] [NCBI NR]
    • Organism: Oryza sativa Indica Group
    Length: 608 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYRAMLQSA AESAIQSIGL GYDIAHDIRL KYCKQRSSPD PLLIELDHDE VQDIVLPGGL  60
   61 TVAGVSKSIK CDKGERTRFR SDVLSFQQMS EQFNQELSLS GKIPSGLFNT MFEFTGCWQK 120
  121 DAANTKSLAF DGWCITLYTV ALSKAQIVLR DHVKQAVPST WEPAALARFI RKFGTHVVVG 180
  181 IKMGGKDIIY LKQQHSSTLQ AVDVQKRLKE MSDRRFLDAN GQSDFSFKDS YGKDKIDTRE 240
  241 HRLRFVDSSP LNSYSSKEDL VMMPKRRGGR DKDILSHSEW LNTVQAEPDV ISMSFIPITS 300
  301 LLNGVPGCGF LNHAINLYLR YKPQIEELHQ FLEFQLPRQW APVYSDLPLG PQRKRQSTVS 360
  361 LPVNLIGPKL YVCTNMVDVG KRPVTGIRLF LEGKRSNKLA IHLQHLCSLP QILQLEDDPY 420
  421 NDQTPEAYDR KYYEPIGSWK RFSHVCTAPV ESDDSSIVTG AQLEVVSHGF KKILFLRLHF 480
  481 SKVCNATSVR NPEWEGSPNL AQKSGLISTL ISTHFSTAAQ KPAPRPADVN INSAVYPGGP 540
  541 PVPVQTPKLL KFVDPTEMMR GPQDLPGYWV VSGAKLQLER GKISLRVKYS LLTAMLPDDD 600
  601 EFAFDEEF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..323] PSI-BLAST 35.39794 No description for 2qqhA was found.
    2 View Details [324..514] MSA 1.063936 View MSA. No confident structure predictions are available.
    3 View Details [515..608] MSA 1.013975 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle