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View Structure Prediction Details

Protein: gi|215697301, gi...
Organism: Oryza sativa Japonica Group
Length: 608 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|215697301, gi....

Description E-value Query
Range
Subject
Range
gi|57900281, gi|... - gi|57900281|dbj|BAD87114.1| unknown protein [Oryza sativa Japonica Group], gi|125573386|gb|EAZ14901....
gi|125529190 - gi|125529190|gb|EAY77304.1| hypothetical protein OsI_05280 [Oryza sativa Indica Group]
780.0 [0..1] [608..1]

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Predicted Domain #1
Region A:
Residues: [1-323]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYRAMLQSA AESAIQSIGL GYDIAHDIRL KYCKQRSSPD PLLIELDHDE VQDIVLPGGL  60
   61 TVAGVSKSIK CDKGERTRFR SDVLSFQQMS EQFNQELSLS GKIPSGLFNT MFEFTGCWQK 120
  121 DAANTKSLAF DGWCITLYTV ALSKAQIVLR DHVKQAVPST WEPAALARFI RKFGTHVVVG 180
  181 IKMGGKDIIY LKQQHSSTLQ AVDVQKRLKE MSDRRFLDAN GQSDFSFKDS YGKDKIDTRE 240
  241 HRLRFVDSSP LNSYSSKEDL VMMPKRRGGR DKDILSHSEW LNTVQAEPDV ISMSFIPITS 300
  301 LLNGVPGCGF LNHAINLYLR YKP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.39794
Match: 2qqhA
Description: No description for 2qqhA was found.

Predicted Domain #2
Region A:
Residues: [324-514]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QIEELHQFLE FQLPRQWAPV YSDLPLGPQR KRQSTVSLPV NLIGPKLYVC TNMVDVGKRP  60
   61 VTGIRLFLEG KRSNKLAIHL QHLCSLPQIL QLEDDPYNDQ TPEAYDRKYY EPIGSWKRFS 120
  121 HVCTAPVESD DSSIVTGAQL EVVSHGFKKI LFLRLHFSKV CNATSVRNPE WEGSPNLAQK 180
  181 SGLISTLIST H

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [515-608]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FSTAAQKPAP RPADVNINSA VYPGGPPVPV QTPKLLKFVD PTEMMRGPQD LPGYWVVSGA  60
   61 KLQLERGKIS LRVKYSLLTA MLPDDDEFAF DEEF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle