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Protein Overview: gi|125529190

General Information:
Name(s) found: gi|125529190 [NCBI NR]
Description(s) found:
  • gi|125529190|gb|EAY77304.1| hypothetical protein OsI_05280 [Oryza sativa Indica Group] [NCBI NR]
    • Organism: Oryza sativa Indica Group
    Length: 608 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHKAKLQSV SESAIRSIGL GYDIANDIRL KNCKQRGSPD PLLIELDHDK VQDIVLPGNL  60
   61 TVTGVSKSIK CDKGERMRFR SDVLSFQQMS EQFNRELSLS GKIPSGFFNA MFEFTGCWQK 120
  121 DASITKSLAF DGWCITLYTV ALSKAHIILK DHVKQAVPST WEPAALARFI KKFGTHIVVG 180
  181 VKMGGKDVIY LKQQHSSSLQ AVDVQKRLKE MSDQRFLDAN GHSDISLADS YAKDNKVEAR 240
  241 EQRLRFVESN PLNSYSSNEE LVMMPKRRGG RDKDIISHSE WLNTVQAEPD VISMSFIPIT 300
  301 SLLNGVPGCG FLNHAINLYL RYKPRVEELH QFLEFQLPRQ WAPVYSDLPL GPQRKRQSSA 360
  361 SLPVNLIGPK LYVCTNMVDV GKRPVTGLRL FLEGQKSNKL AIHLQHLCSL PQIIQLEDDT 420
  421 YNPQTPEAEI RKYYEPIGSW KRFSHVCTAP VDSDDSSIVT GAHLEVVSHG FKKILFLRLH 480
  481 FSKVCNATSV KNPEWDGSPN LGQKSGLIST LISTHFSTAA LKPAPRPAEV NINSAVYPGG 540
  541 PPVPVQTPKL LRFVDTTEML RGPQDLPGYW VVSGAKLHLE RGKISLRVKY SLLTVNSPDD 600
  601 EFSPDEEF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..359] PSI-BLAST 30.0 No description for 2qqhA was found.
    2 View Details [360..509] MSA 1.097939 View MSA. No confident structure predictions are available.
    3 View Details [510..608] MSA 1.013975 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle